| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0006 |
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| Symbol | |
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| ID | 3786444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 7704 |
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| End bp | 8804 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637810074 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_410707 |
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| Protein GI | 82701141 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCGC CAACCGATTA CCGCTTCATG GCCCAGGCGC TGCGGCTTGC AGAAAAAGGG
CTTTATAGTA CAAGCCCGAA CCCCCGCGTG GGTTGTGTGC TGGTACGCGA TGGACAGGTG
GTGGGTACGG GCTGGCACGA ACGCGCTGGC GAAGCGCATG CGGAAATAAA TGCACTGGCT
GCCGCCGGAC CGGCAGCCCG GGGCGCCCTT GCCTATCTCA CGCTGGAGCC GTGCAGTCAC
TATGGCCGCA CTCCACCCTG CGCCGATGCC CTGGTTCAGG CAGGTGTCGC GAAAGTCATT
ACAGCCATGC AGGACCCGAA TCCCCTCGTG GCCGGTCGCG GCTGCGCCCT TCTGGAAGAG
GCGGGGATAG AAGTGAAAAC CGGCTTGATG GAAGCGGAAG CGAAAGCTTT GAATATCGGA
TTTGTCTCGC GCATGACCCG CGGTCGTCCC TGGGTCAGGG TCAAGATCGC GGCAAGTCTC
GATGGCAAGA CGGCGCTCAA CAACGGGTCC AGTCAATGGA TCACGAGCGC GGCGGCACGC
CGGGACGGGC ACCGCTGGCG CGCCCGTTCC TGCGCGGTAA TGACCGGCAT TGGTACGGTG
TTGGCCGATG ACCCGCAGCT CACGGTGCGC CATATCCATA CCTCCAGGCA ACCTATGCCG
GTAGTGGTGG ACAGGGGACT GGATATACCG CTGGATGCAG GATTGCTGCG AGGCGCAGGC
GAACTGGTTT TTACCGCTGC TGCCAGTGAA GGCAAAATTG TCGCGTTACG GGACGTGGGG
GCGCACGTCA TCCTGTTGCC GGATAGCGCT GGCAACGTGG ATCTGGCTGC TATGATGCGA
CGGCTTGCGG ATCTCGAAAT AAACGAAGTG CTGGTGGAGG CGGGATCCGG CTTGAATGGA
GGGCTTATCC AGGCGGATTT GGTGGATGAG TTCGTCATTT ATCTTGCCCC CTGTCTGATC
GGGAATGCGG CGCGGGACAT GCTCAAATTA CCGGAACTCT CGAATCTGGA AGACAAGCGA
GCCCTCAAGA TCCACAATGT ACGCGCCGTG GGGCAGGATA TTCGCATTAT TGCCCGTGGC
CCTGACGGGA TGGCTACATA A
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| Protein sequence | MFSPTDYRFM AQALRLAEKG LYSTSPNPRV GCVLVRDGQV VGTGWHERAG EAHAEINALA
AAGPAARGAL AYLTLEPCSH YGRTPPCADA LVQAGVAKVI TAMQDPNPLV AGRGCALLEE
AGIEVKTGLM EAEAKALNIG FVSRMTRGRP WVRVKIAASL DGKTALNNGS SQWITSAAAR
RDGHRWRARS CAVMTGIGTV LADDPQLTVR HIHTSRQPMP VVVDRGLDIP LDAGLLRGAG
ELVFTAAASE GKIVALRDVG AHVILLPDSA GNVDLAAMMR RLADLEINEV LVEAGSGLNG
GLIQADLVDE FVIYLAPCLI GNAARDMLKL PELSNLEDKR ALKIHNVRAV GQDIRIIARG
PDGMAT
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