| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0003 |
|---|
| Symbol | gyrB |
|---|
| ID | 3786441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 3157 |
|---|
| End bp | 5589 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 810 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637810071 |
|---|
| Product | DNA gyrase subunit B |
|---|
| Protein accession | YP_410704 |
|---|
| Protein GI | 82701138 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.835475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA AAGAGCGTTC CCGGCAGCAA AAAAGCAAAA GCTCCGCCGA CTATGGCTCG
GACAGCATCA AGATCCTGAA AGGGCTCGAT GCGGTGCGCA AGCGTCCCGG TATGTACATT
GGCGATACCA GCGACGGCAC CGGCCTGCAC CATATGGTAT TCGAGGTATT GGATAATGCG
ATTGACGAGG CGCTGGCCGG TTACTGTGAT GAGATTTCGG TCATTATCCA CCCCGACAAC
TCGGTTACGG TCCAGGACAA TGGTCGCGGC ATTCCGACAG GCATAAAGCA GGATGACGAG
CTCAAGCGTT CCGCTGCTGA AATCGTCATG ACCGAACTCC ACGCCGGAGG TAAGTTCGAT
TCAGATTCAT ACAAGGTATC AGGCGGCTTG CACGGCGTTG GCGTCTCGGT CGTGAATGCT
CTGTCGGAAT GGTTACGCCT TTCCATCCGT CGGGATGGAA AGATCCATCA GATCGAGTTC
CGCATGGGCG TGCCGGTGGG GCCGCTGGCT ACGACCGGAA AGACTGAACG ACGTGGCACC
GAAGTACATT TTCTGGCGAG CAAGGAAATA TTCGGAGATA TCGAATACCA CTACGACATA
TTTGCCAAGC GGCTGCGGGA ACTTTCCTTT CTCAACAATG GTGTCAAAAT CCATCTCATA
GACCAACGCA ACGCCAAGGA AGAAACATTT GCCTTTGTGG GTGGGGTCAA GAGTTTTGTC
GAGTATGTCA ATCGCACCAA GTCGGTGCTT CATCCCAATA TCTTCTATGC AGCGGGAGAA
AAAGACCGCA TTGCGGTGGA AGTCTCCATG CAATGGAATG ACAGCTATAC CGAGCAGGTG
CTGTGCTTTA CAAACAATAT TCCGCAAAAG GATGGCGGTA CTCATCTCAC GGGTTTGCGC
GCTGCCATGA CGCGCACCCT GAACAATTAC ATCGAAAAAA GCGATCTCGC AAAAAAAGCC
AAAATCGAAA CCTCGGGCGA CGACATGCGC GAGGGTCTGT CATGTGTTTT GTCAGTCAAG
CTGTTCGAAC CCAAGTTTTC ATCCCAAACC AAGGAAAAGC TCGTCTCGTC GGAAGTGCGG
CCGGTAGTGG AAGAAATCGT ATCGCTCAAA TTGGCGGAAT TCCTCATGGA GCATCCGGTC
GATGCGAAAA TCATCTGCGG CAAGATCATC GAAGCGGCCA GAGCGCGCGA GGCAGCGCGC
AAGGCGCGGG AATTGACGCG GCGCAAAGGT GTGCTGGATG GCATGGGTTT ACCCGGAAAG
CTGGCGGATT GCCAGGAGAA GGATCCGGCT CTGTCCGAGC TTTATCTGGT GGAGGGCGAT
TCCGCCGGCG GCTCGGCCAA GCAGGGACGC GACCGCAAGT TCCAGGCCAT CATGCCGCTG
AAAGGAAAAA TCCTCAATGT GGAAAAAGCC CGTTTTGACA AGCTGATTTC CTCGCAGGAA
ATTGCATCCC TCATCACGGC GCTTGGTACC GGTATCGGCA AGGACGAGTA TAACCCTGAC
AAATTGCGCT ATCACCGCAT CATCATCATG ACTGATGCCG ACGTGGATGG CTCGCATATC
CGCACCTTGC TGCTTACTTT CTTTTACCGA CAGATGCCGG AACTGATCGA GCGCGGCCAT
ATCTTCATCG CCCAGCCGCC GTTGTACAAG ATCAAGCACG GCAAGCAGGA ACGCTACGTC
AAGGACGATC ACGAGCTCAA GCAATATCTG CTGGGCCTGG CGTTGACGGA GGCGGAACTG
CATACGGGAG AGGGAAAATC GCCGCTGACT GGAGAAACGC TGGAAAATAT CGCAAATGAA
TATCTCCTGG CGGAAGCCGT GATCGAGCGC ATGAGTTCGC TGATCGATAG CGAAGTCATG
CATGCGTTGT TACGCCATTC CGACATCGAT CTAAGTAATG AGGAGCTCGC AACCGAAAGT
GCGGTTCGTC TGGCGGCACA GGTCAATGCA CCAAATATCA CCATCGTACC CAAGTATGAC
GTCGCCACGG AAGAGTACCG GCTGAAAATC TCTCGCATGC ATCACGGCAA CGTTCGCTAC
AGCTACATCG ACCAGGATTT TCTGCAAAGC GGTGACTATG CGCAAATCAG GCAAACCGCC
GAGGTGCTCG ACGGCCTGAT CGGGCCGGCA GCTTATGTGC AACGCGGCGA GAAGAAACAG
GCAGTAAGCG ACTTCAAGCA AGCACTCGAC TGGCTGCTGG AGGAAGTCAA AAAAGGCATC
GGCACTCAAC GTTACAAAGG TCTGGGCGAA ATGAATCCGG CTCAACTCTG GGAAACGACC
ATGGACCCGA AGGTTCGCCT TCTGCTGCGT GCCCAGATCG AGGACAGTAT CGCCGCGGAT
GAGATTTTCA CCACCCTGAT GGGCGATATC GTGGAACCTC GGCGTGCGTT CATCGAGAAC
AACGCGCTGG GAGTGAGGAA TCTTGATGTT TAA
|
|---|
| Protein sequence | MNEKERSRQQ KSKSSADYGS DSIKILKGLD AVRKRPGMYI GDTSDGTGLH HMVFEVLDNA
IDEALAGYCD EISVIIHPDN SVTVQDNGRG IPTGIKQDDE LKRSAAEIVM TELHAGGKFD
SDSYKVSGGL HGVGVSVVNA LSEWLRLSIR RDGKIHQIEF RMGVPVGPLA TTGKTERRGT
EVHFLASKEI FGDIEYHYDI FAKRLRELSF LNNGVKIHLI DQRNAKEETF AFVGGVKSFV
EYVNRTKSVL HPNIFYAAGE KDRIAVEVSM QWNDSYTEQV LCFTNNIPQK DGGTHLTGLR
AAMTRTLNNY IEKSDLAKKA KIETSGDDMR EGLSCVLSVK LFEPKFSSQT KEKLVSSEVR
PVVEEIVSLK LAEFLMEHPV DAKIICGKII EAARAREAAR KARELTRRKG VLDGMGLPGK
LADCQEKDPA LSELYLVEGD SAGGSAKQGR DRKFQAIMPL KGKILNVEKA RFDKLISSQE
IASLITALGT GIGKDEYNPD KLRYHRIIIM TDADVDGSHI RTLLLTFFYR QMPELIERGH
IFIAQPPLYK IKHGKQERYV KDDHELKQYL LGLALTEAEL HTGEGKSPLT GETLENIANE
YLLAEAVIER MSSLIDSEVM HALLRHSDID LSNEELATES AVRLAAQVNA PNITIVPKYD
VATEEYRLKI SRMHHGNVRY SYIDQDFLQS GDYAQIRQTA EVLDGLIGPA AYVQRGEKKQ
AVSDFKQALD WLLEEVKKGI GTQRYKGLGE MNPAQLWETT MDPKVRLLLR AQIEDSIAAD
EIFTTLMGDI VEPRRAFIEN NALGVRNLDV
|
|---|
| |