Gene Synpcc7942_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2613 
Symbol 
ID3775584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2695049 
End bp2695870 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID637801067 
Productphosphoglycolate phosphatase 
Protein accessionYP_401630 
Protein GI81301422 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0917169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0942866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAA GATCCTGGAA AGCTTTCATA GCAAGACTTT CAGCGATCGA CCCCTGTGGA 
AAAGCTGTGG AAAAACTAAG AGGGTTTTCC ACAGGGGGGA TCAAGGGGGG TTCCTTTCTC
CACAGACTGA AGGGGTTTTC CACAAGAAAT CCACAGGTTT TTCCACAGAG TTATCCACAG
ACTTTGCAGG CGATTATTTT TGATTTTGAT GGAACTTTAG TAGATTCTCT GCCTACTGTA
GTTGCAATCG CTAATGCTCA TGCCCCGGAT TTTGGTTATG ACCCGATCGA TGAGCGTGAC
TATGCGCAAC TGCGTCAGTG GTCTTCCCGC ACGATCGTGC GGCGTGCGGG TCTGTCACCT
TGGCAGCAGG CGCGGTTACT CCAACGGGTG CAACGCCAGC TAGGGGATTG TCTACCGGCG
CTGCAGCTCT TTCCTGGGGT TGCAGACCTC TTGGCTCAAC TGCGATCGCG ATCGCTCTGT
CTTGGGATTC TTAGCTCCAA CAGTCGGCAG AACATCGAAG CCTTTTTGCA ACGACAAGGT
CTGCGATCGC TGTTCTCTGT CGTTCAAGCT GGAACGCCCA TTTTGAGTAA GCGTCGGGCT
CTCAGTCAGT TGGTGGCTCG CGAGGGCTGG CAGCCAGCAG CTGTGATGTA TGTCGGCGAT
GAAACCCGCG ATGTGGAAGC TGCTCGTCAG GTGGGTCTGA TTGCTGTGGC CGTGACTTGG
GGCTTTAACG ATCGCCAAAG CCTGGTCGCG GCCTGTCCTG ATTGGCTACT AGAAACTCCC
TCAGACCTAT TGCAAGCTGT GACGCAACTG ATGCGACAGT AG
 
Protein sequence
MWKRSWKAFI ARLSAIDPCG KAVEKLRGFS TGGIKGGSFL HRLKGFSTRN PQVFPQSYPQ 
TLQAIIFDFD GTLVDSLPTV VAIANAHAPD FGYDPIDERD YAQLRQWSSR TIVRRAGLSP
WQQARLLQRV QRQLGDCLPA LQLFPGVADL LAQLRSRSLC LGILSSNSRQ NIEAFLQRQG
LRSLFSVVQA GTPILSKRRA LSQLVAREGW QPAAVMYVGD ETRDVEAARQ VGLIAVAVTW
GFNDRQSLVA ACPDWLLETP SDLLQAVTQL MRQ