Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2611 |
Symbol | |
ID | 3775582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2692993 |
End bp | 2693757 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637801065 |
Product | hypothetical protein |
Protein accession | YP_401628 |
Protein GI | 81301420 |
COG category | [S] Function unknown |
COG ID | [COG2138] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.975318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0888228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGT TTACCGTGCT CCCTTCGCTC CTCAATGATG AGACTTCGGC TAGGTTCATG TTGCGTGTTT TAGTCGCCCA TGGCAGTCGC GATCCGCGGT CGGCGATCGC ATTGCAGCAA TTGGCCACCG ACCTCACGCC TCTGCTAGGA ACTACGCCCG CGATTGCTTT TTTGGAAGGC CCTCATCCGC CCCTAGCCGA CCAGATTGTG CAGTTGGCTC AGCAGGCTAA AACTCAGGGT GCGATCACGG TTCGGGTTTA TCCCCTGTTT CTGCTGGCAG GCACCCACAC CACAGAGGAT TTGCCGGCAG CGATCGCCAC CGCTCAAACG CAGATCCCTT TGCCCGTTGA ACTGCAGCCC GCCTGGGGTG AATCGGACAG TCTGCGCAGT CTGCTGCGAT CGCAAGTCAC CCCCGCAACT GAAACGTGGC TGTTAGCTCA TGGCAGTCGT CGCCCTGAAG CCAATCAGCA AATTGAACAA TTGGCGGCTG AATTCGGCTG GCCTGCAGTG TTTTGTCGAG CAGAACCGCT GCTGAACGAT CGCTTGGCTC GCACCCAGCC CCAACGCCTC TTGCCCTTGT TGCTTTTTCC GGGGCCGATT TACGACAGTG TGCAAGCACT TTGTGAAGCG GCTGATGCCT CTGCTTGCTT GGCACCCCCG CTGAGCCAAT GGCCCCGGTT CTTAGAGGCA ATTGCCCAGT GGCTCCAATT TGATCTTGCT ATCAGCGATA ATCGAGCCTC GACCCCTTCT CGTTTTCCAC AGTAG
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Protein sequence | MTQFTVLPSL LNDETSARFM LRVLVAHGSR DPRSAIALQQ LATDLTPLLG TTPAIAFLEG PHPPLADQIV QLAQQAKTQG AITVRVYPLF LLAGTHTTED LPAAIATAQT QIPLPVELQP AWGESDSLRS LLRSQVTPAT ETWLLAHGSR RPEANQQIEQ LAAEFGWPAV FCRAEPLLND RLARTQPQRL LPLLLFPGPI YDSVQALCEA ADASACLAPP LSQWPRFLEA IAQWLQFDLA ISDNRASTPS RFPQ
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