Gene Synpcc7942_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2611 
Symbol 
ID3775582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2692993 
End bp2693757 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content57% 
IMG OID637801065 
Producthypothetical protein 
Protein accessionYP_401628 
Protein GI81301420 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.975318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0888228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGT TTACCGTGCT CCCTTCGCTC CTCAATGATG AGACTTCGGC TAGGTTCATG 
TTGCGTGTTT TAGTCGCCCA TGGCAGTCGC GATCCGCGGT CGGCGATCGC ATTGCAGCAA
TTGGCCACCG ACCTCACGCC TCTGCTAGGA ACTACGCCCG CGATTGCTTT TTTGGAAGGC
CCTCATCCGC CCCTAGCCGA CCAGATTGTG CAGTTGGCTC AGCAGGCTAA AACTCAGGGT
GCGATCACGG TTCGGGTTTA TCCCCTGTTT CTGCTGGCAG GCACCCACAC CACAGAGGAT
TTGCCGGCAG CGATCGCCAC CGCTCAAACG CAGATCCCTT TGCCCGTTGA ACTGCAGCCC
GCCTGGGGTG AATCGGACAG TCTGCGCAGT CTGCTGCGAT CGCAAGTCAC CCCCGCAACT
GAAACGTGGC TGTTAGCTCA TGGCAGTCGT CGCCCTGAAG CCAATCAGCA AATTGAACAA
TTGGCGGCTG AATTCGGCTG GCCTGCAGTG TTTTGTCGAG CAGAACCGCT GCTGAACGAT
CGCTTGGCTC GCACCCAGCC CCAACGCCTC TTGCCCTTGT TGCTTTTTCC GGGGCCGATT
TACGACAGTG TGCAAGCACT TTGTGAAGCG GCTGATGCCT CTGCTTGCTT GGCACCCCCG
CTGAGCCAAT GGCCCCGGTT CTTAGAGGCA ATTGCCCAGT GGCTCCAATT TGATCTTGCT
ATCAGCGATA ATCGAGCCTC GACCCCTTCT CGTTTTCCAC AGTAG
 
Protein sequence
MTQFTVLPSL LNDETSARFM LRVLVAHGSR DPRSAIALQQ LATDLTPLLG TTPAIAFLEG 
PHPPLADQIV QLAQQAKTQG AITVRVYPLF LLAGTHTTED LPAAIATAQT QIPLPVELQP
AWGESDSLRS LLRSQVTPAT ETWLLAHGSR RPEANQQIEQ LAAEFGWPAV FCRAEPLLND
RLARTQPQRL LPLLLFPGPI YDSVQALCEA ADASACLAPP LSQWPRFLEA IAQWLQFDLA
ISDNRASTPS RFPQ