| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2579 |
|---|
| Symbol | |
|---|
| ID | 3775175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2663566 |
|---|
| End bp | 2664450 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637801032 |
|---|
| Product | heat shock protein DnaJ-like |
|---|
| Protein accession | YP_401596 |
|---|
| Protein GI | 81301388 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGTT CTGCGTCGCC CATGCAAAAT TTTCGCGACT ACTATGCCCT CCTGGGGATC
CCTCAGTCGG CGGATCAGGC TGCAATTAAA GCAGCCTTTC GCAAGCTGGC ACGCCAGTGC
CATCCCGACC TCAATCCGGG CGATCGCCAA GCTGAGGAGC GGTTCAAGCA GATCAGTGAA
GCCTACGAGA TCCTTTCAGA TCCTGATCGC CGCGCCGAAT ATCAGCGCTT TAGCCGCTAT
TGGCAACAAC AGGGTGCTGC ATCCGTAGGG AGTGACGATG ACTACGGCGA TTTCCCTGAC
TTCGACATTT TTGTCGATGA ACTCTTGGGG CGTCGCACCG TTGAGCGATC GCCACGTCGT
TCTGCCCGCC GCTCGGCTGC GACCTCATCG GCTCTGTCAC GAGATCTTGA GCGATCGCTA
GAAGTGGATC CCAAGACTGC GTTGCAGGGT GGTTCAGCTC AGCTACAACT GGAAGATGGT
CGCTTGCTAG AGGTGGATAT TCCGGCTGGA ATCCAAGCGG GTGAATATCT GCGGCTGCGG
GGGCAAGGCA TCAAGGGTGG TGATTTGCTG CTACGGGTGC AACTGCAGGC TTCGAATTTT
CAGGTTCAAG GGTCAGATGT GATCTACACC CTGAACGTCA GTCCTGCTAT GGCGGTACTC
GGTGGACAGG TCACTGTTCC AACTTTGGAT GGCCCTGTGC AGATGAAATT GCCTGCTTCC
TTGCGGTCGG GACAACGCCT GCGCTTGGCT GGCAAGGGCT ACAGCAAACC CAGTGGTGAT
CGCGGTGATC AAATCGTGGT GATTCAGCTG CAACTGCCCA CGCGCCTCAG CCCCGAAGAA
CGCCAGCTTT ACGAACAACT GCGATCGCTC GAACAATCGC GTTGA
|
|---|
| Protein sequence | MTRSASPMQN FRDYYALLGI PQSADQAAIK AAFRKLARQC HPDLNPGDRQ AEERFKQISE
AYEILSDPDR RAEYQRFSRY WQQQGAASVG SDDDYGDFPD FDIFVDELLG RRTVERSPRR
SARRSAATSS ALSRDLERSL EVDPKTALQG GSAQLQLEDG RLLEVDIPAG IQAGEYLRLR
GQGIKGGDLL LRVQLQASNF QVQGSDVIYT LNVSPAMAVL GGQVTVPTLD GPVQMKLPAS
LRSGQRLRLA GKGYSKPSGD RGDQIVVIQL QLPTRLSPEE RQLYEQLRSL EQSR
|
|---|
| |