Gene Synpcc7942_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2578 
Symbol 
ID3775174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2663093 
End bp2663566 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID637801031 
Producthypothetical protein 
Protein accessionYP_401595 
Protein GI81301387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGG GTTCGACCCT GCGAGATCAG GGAATAAGAT GGTGCCAGCG ATCACAGGCG 
CCTATGAAGG TCTACGTTCT GCTCTACAAC GCGGGCACTG ATAACGAGGG GATCCATTCG
CTTTCGATCG GGGATGAAAA CATCATCCTG ATGTTTGAAG ACGAGGATGA TGCCCAGCGC
TACGCCATGT TGCTCGAAGC GCAGGACTTT CAGGCTCCCA TTGTCGAAGC GATTGACCGC
GAAGAAGTCG AAGCTTTTTG CCAAGACTCC CCCTATCAGC CGCAATTGAT TCCCCGGGAT
TTTCGACCCA GCAATGACTT TGAACGGTTG CTGCTCGCCC CGCCAGAGTT GAATCGCGAG
GAAACCGATT GGTCTGAGGA TGGTCGTTCG GCAGACGTTG CGGATGAGGA GGCAGACTCA
CTACCTGCCA GTGATCTCGA AGCATTGCGT CGCCGTCTAG AAGGCTTGCT CTAA
 
Protein sequence
MELGSTLRDQ GIRWCQRSQA PMKVYVLLYN AGTDNEGIHS LSIGDENIIL MFEDEDDAQR 
YAMLLEAQDF QAPIVEAIDR EEVEAFCQDS PYQPQLIPRD FRPSNDFERL LLAPPELNRE
ETDWSEDGRS ADVADEEADS LPASDLEALR RRLEGLL