Gene Synpcc7942_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2574 
Symbol 
ID3775167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2653347 
End bp2654102 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content57% 
IMG OID637801024 
ProductATPase 
Protein accessionYP_401591 
Protein GI81301383 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.523052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGG CTTCCGCTCC TAACCCGCCT ACGCTGCAGG CGCATCATCT GAGTGCTAGC 
TATCGCGATC GCGAGGTGTT GCAGGACGTT AATCTCCAGT TGCGAGCTGG CCAAGTGGTC
GGCATTGTGG GGCCGAATGG GGCTGGTAAG AGTACCTTTC TTAAGGCGTT GCTGGGACTT
GTGCCTCACC AGGGTGAGGT TTTTTGGCGT GGGCTACCTC TCGCAAGTCG GCTACCACAT
GTCGCCTATG TTCCCCAGCG GGCTCAGGTG GATTTTGATT ACCCAGCAAC AGTCTGGGAT
GTGGTCCTCA TGGGGCGAGT GGCTCAGACG GGCTGGCTCC GGCGGTTCTC TGCTGCCAGT
CAACAAGCAG TTAAGGCTGC GTTAGATCGT GTGGAATTGT GGGATTTGCG ATCGCGACCA
ATTGGGGAAC TGTCTGGCGG TCAGCAGCAG CGGGTTTTTA TCGCGCGATC GCTCGCTCAA
GAGGCCGAGC TATTCCTGTT GGATGAGCCC TTCGCTGGCA TCGATCGCCG GAGCGAGGGC
TTACTCTATG AAATTTTGCG GGATTTGGCA CAGCAAGGAC ATGGCGTTGT GGTCGTGCAT
CATGATTTAG GCCAAGCCAT TCAGCAATTT GATGAACTGG TGCTGCTGAA TCAGCGTGTG
ATTGCTCAGG GGCATCCGCG CTTGGTCTTG CAGCCTGACC ATTTAGCTCG AGCCTATGGA
GCGCGCTTGG ATATAACTCG GTACGAGGCA GCCTAG
 
Protein sequence
MSQASAPNPP TLQAHHLSAS YRDREVLQDV NLQLRAGQVV GIVGPNGAGK STFLKALLGL 
VPHQGEVFWR GLPLASRLPH VAYVPQRAQV DFDYPATVWD VVLMGRVAQT GWLRRFSAAS
QQAVKAALDR VELWDLRSRP IGELSGGQQQ RVFIARSLAQ EAELFLLDEP FAGIDRRSEG
LLYEILRDLA QQGHGVVVVH HDLGQAIQQF DELVLLNQRV IAQGHPRLVL QPDHLARAYG
ARLDITRYEA A