Gene Synpcc7942_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2567 
Symbol 
ID3775160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2646633 
End bp2647616 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content58% 
IMG OID637801017 
Productthiamine monophosphate kinase 
Protein accessionYP_401584 
Protein GI81301376 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATC GCAGCCTTTC AGAGCTAGGT GAGCAGGGCT TGCTACCACT TCTGCAAGCG 
TTTTGCCCAG CCGAACAGCG CGGTGATGAT GCAGCCATTC TGACGCCACC GGCGGGGCAA
CAATTGGTCG TCAGCAGTGA TGTCTTGGTG GAAGGCATCC ATTTCAGTGA GGCCACCACA
CCGCCAGCAG CGATCGGTTG GCGAGCGGCG GCCGCGAATC TCTCAGATTT AGCAGCCATG
GGTGCCACGC CTGCAGGGAT CACCTTAGCC TTGGCACTCC CGAGCGATCG CCGGCTGAGT
TGGCTCCAGC AGATTTATCA AGGGCTCGAT CGCTGCCTGA AGCAATACGA CTGTCCGTTG
ATTGGCGGTG ATCTAAGTCG ATCGCCAACT GCAACGCTGG CCGTCACGGC ACTCGGTTGG
GTCAATCCCA ATCGCGTGAT TCGGCGATCG ACAGCTCAAG TCGGTGATTG GATTATGGCA
ACAGGAACCC ATGGTCTGTC CCGACTTGGC CTCGGGCATC TACTAGGAGA ATGGACGCTG
GCAGAACCGC TGCGAGATCA AGCGATCGCC GCCCATCAAG CGCCGAAACC ACGCTTGGAT
GTGGTGCCGC TACTAGCGCG ATCGCAACCA GCGGGCACTG TTTGGCGAGT CGCTGGAATG
GACAGCAGTG ATGGGTTGGC GGATGCTGTT TTACAAATTT GCCGCGCCAG TCAGGTTGGA
GCAGTGATCG AGGCTTTACC GCTGCCAGCC ACAACGAGTT TTGATCGCGA TCGCCTGATT
CAGGCCGCAC TCTACGGCGG CGAGGATTTT GAGCTAGTGC TCTGCCTCTC GCCAGATTGG
GCGCAGGCGC TGCTTGAGCT TCTAGGCGAG CAGGCACAGG TAATCGGCCA GATTACCGAG
AAACCAGTTG TTCAGCTAAG ACTGAGCGAT CGCACGGAAA TTTTGAGTCT CGATCGCGGC
TTTCAGCATT TCACAACCCA TTGA
 
Protein sequence
MSDRSLSELG EQGLLPLLQA FCPAEQRGDD AAILTPPAGQ QLVVSSDVLV EGIHFSEATT 
PPAAIGWRAA AANLSDLAAM GATPAGITLA LALPSDRRLS WLQQIYQGLD RCLKQYDCPL
IGGDLSRSPT ATLAVTALGW VNPNRVIRRS TAQVGDWIMA TGTHGLSRLG LGHLLGEWTL
AEPLRDQAIA AHQAPKPRLD VVPLLARSQP AGTVWRVAGM DSSDGLADAV LQICRASQVG
AVIEALPLPA TTSFDRDRLI QAALYGGEDF ELVLCLSPDW AQALLELLGE QAQVIGQITE
KPVVQLRLSD RTEILSLDRG FQHFTTH