Gene Synpcc7942_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2561 
Symbol 
ID3775154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2639146 
End bp2639982 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content55% 
IMG OID637801011 
ProductDelta-9 acyl-phospholipid desaturase 
Protein accessionYP_401578 
Protein GI81301370 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.701593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG CTATCCGACC CAAGCTTGCC TTCAACTGGC CGACCGCCCT GTTCATGGTC 
GCCATTCACA TTGGAGCACT GTTAGCGTTC CTGCCGGCCA ACTTTAACTG GCCCGCTGTG
GGCGTGATGG TTGCGCTGTA TTACATTACC GGTTGTTTTG GCATCACCCT AGGCTGGCAC
CGGCTAATTT CGCACCGTAG CTTTGAAGTT CCCAAATGGC TGGAATACGT GCTGGTGTTC
TGTGGCACCT TGGCCATGCA GCACGGCCCG ATCGAATGGA TCGGTCTGCA CCGCCACCAT
CACCTCCACT CTGACCAAGA TGTCGATCAC CACGACTCCA ACAAGGGTTT CCTCTGGAGT
CACTTCCTGT GGATGATCTA CGAAATTCCG GCCCGTACGG AAGTAGACAA GTTCACGCGC
GATATCGCTG GCGACCCTGT CTATCGCTTC TTTAACAAAT ATTTCTTCGG TGTCCAAGTC
CTACTGGGGG TACTTTTGTA CGCCTGGGGC GAGGCTTGGG TTGGCAATGG CTGGTCTTTC
GTCGTTTGGG GGATCTTCGC CCGCTTGGTG GTGGTCTACC ACGTCACTTG GCTGGTGAAC
AGTGCTACCC ACAAGTTTGG CTACCGCTCC CATGAGTCTG GCGACCAGTC CACCAACTGC
TGGTGGGTTG CCCTTCTGGC CTTTGGTGAA GGCTGGCACA ACAACCACCA CGCCTACCAG
TACTCGGCAC GTCATGGCCT GCAGTGGTGG GAATTTGACT TGACTTGGTT GATCATCTGC
GGCCTGAAGA AGGTGGGTCT GGCTCGCAAG ATCAAAGTGG CGTCTCCAAA CAACTAA
 
Protein sequence
MTLAIRPKLA FNWPTALFMV AIHIGALLAF LPANFNWPAV GVMVALYYIT GCFGITLGWH 
RLISHRSFEV PKWLEYVLVF CGTLAMQHGP IEWIGLHRHH HLHSDQDVDH HDSNKGFLWS
HFLWMIYEIP ARTEVDKFTR DIAGDPVYRF FNKYFFGVQV LLGVLLYAWG EAWVGNGWSF
VVWGIFARLV VVYHVTWLVN SATHKFGYRS HESGDQSTNC WWVALLAFGE GWHNNHHAYQ
YSARHGLQWW EFDLTWLIIC GLKKVGLARK IKVASPNN