Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2561 |
Symbol | |
ID | 3775154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2639146 |
End bp | 2639982 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637801011 |
Product | Delta-9 acyl-phospholipid desaturase |
Protein accession | YP_401578 |
Protein GI | 81301370 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.701593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTG CTATCCGACC CAAGCTTGCC TTCAACTGGC CGACCGCCCT GTTCATGGTC GCCATTCACA TTGGAGCACT GTTAGCGTTC CTGCCGGCCA ACTTTAACTG GCCCGCTGTG GGCGTGATGG TTGCGCTGTA TTACATTACC GGTTGTTTTG GCATCACCCT AGGCTGGCAC CGGCTAATTT CGCACCGTAG CTTTGAAGTT CCCAAATGGC TGGAATACGT GCTGGTGTTC TGTGGCACCT TGGCCATGCA GCACGGCCCG ATCGAATGGA TCGGTCTGCA CCGCCACCAT CACCTCCACT CTGACCAAGA TGTCGATCAC CACGACTCCA ACAAGGGTTT CCTCTGGAGT CACTTCCTGT GGATGATCTA CGAAATTCCG GCCCGTACGG AAGTAGACAA GTTCACGCGC GATATCGCTG GCGACCCTGT CTATCGCTTC TTTAACAAAT ATTTCTTCGG TGTCCAAGTC CTACTGGGGG TACTTTTGTA CGCCTGGGGC GAGGCTTGGG TTGGCAATGG CTGGTCTTTC GTCGTTTGGG GGATCTTCGC CCGCTTGGTG GTGGTCTACC ACGTCACTTG GCTGGTGAAC AGTGCTACCC ACAAGTTTGG CTACCGCTCC CATGAGTCTG GCGACCAGTC CACCAACTGC TGGTGGGTTG CCCTTCTGGC CTTTGGTGAA GGCTGGCACA ACAACCACCA CGCCTACCAG TACTCGGCAC GTCATGGCCT GCAGTGGTGG GAATTTGACT TGACTTGGTT GATCATCTGC GGCCTGAAGA AGGTGGGTCT GGCTCGCAAG ATCAAAGTGG CGTCTCCAAA CAACTAA
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Protein sequence | MTLAIRPKLA FNWPTALFMV AIHIGALLAF LPANFNWPAV GVMVALYYIT GCFGITLGWH RLISHRSFEV PKWLEYVLVF CGTLAMQHGP IEWIGLHRHH HLHSDQDVDH HDSNKGFLWS HFLWMIYEIP ARTEVDKFTR DIAGDPVYRF FNKYFFGVQV LLGVLLYAWG EAWVGNGWSF VVWGIFARLV VVYHVTWLVN SATHKFGYRS HESGDQSTNC WWVALLAFGE GWHNNHHAYQ YSARHGLQWW EFDLTWLIIC GLKKVGLARK IKVASPNN
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