| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2557 |
|---|
| Symbol | |
|---|
| ID | 3775150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2635638 |
|---|
| End bp | 2636354 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637801007 |
|---|
| Product | bidirectional hydrogenase complex protein HoxU |
|---|
| Protein accession | YP_401574 |
|---|
| Protein GI | 81301366 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.379328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG TCACCTTACA AATTGATGAT CAAGAGCTGG CTGCCAACGT AGGCCAAACG
GTGCTGCAGG TGGCTCGCGA GGCGAGCATT CCGATTCCGA CCCTCTGCCA TCTTCAAGGG
GTGAGTGATG TAGGAGCCTG TCGTCTCTGC GTCGTGGAAG TGGCGGGATC GCCTAAGCTG
CAACCGGCTT GTTTACTGAC GGTCAGTGAA GGTTTGGTGG TGCAAACGCG ATCGCCCCGC
CTTGAGCGCT ACCGCCGCCA GATTGTCGAA CTCTTTTTTG CGGAAGGCAA TCACGTTTGT
GCGATCTGTG TGGCCAATGG CAATTGCGAA CTGCAGGATG CCGCGATCGC CGTCGGCATG
GATCACAGCC GCTACCCTTA CCGTTTCCCG AAACGGGACG TCGATCTATC GCACCGCTTC
TTTGGGCTGG ATCACAATCG CTGCATTCTC TGTACGCGCT GTGTGCGGGT TTGTGACGAA
ATCGAAGGGG CGCATGTCTG GGATGTGGCG ATGAGGGGCG AGCACTGTCG GATTGTTGCC
GGCATGGATC AGCCTTGGGG CGCAGTCGAT GCCTGCACCA ACTGCGGCAA ATGTATCGAT
GCCTGCCCGA CCGGAGCGCT GTTCCACAAG GGCGAAACTA CGGGCGAAAT TGAGCGCGAT
CGCGACAAGT TAGCGTTCTT GGCCGAAGCA CGAGGACAGC GGCGATGGAC AAGATAA
|
|---|
| Protein sequence | MSVVTLQIDD QELAANVGQT VLQVAREASI PIPTLCHLQG VSDVGACRLC VVEVAGSPKL
QPACLLTVSE GLVVQTRSPR LERYRRQIVE LFFAEGNHVC AICVANGNCE LQDAAIAVGM
DHSRYPYRFP KRDVDLSHRF FGLDHNRCIL CTRCVRVCDE IEGAHVWDVA MRGEHCRIVA
GMDQPWGAVD ACTNCGKCID ACPTGALFHK GETTGEIERD RDKLAFLAEA RGQRRWTR
|
|---|
| |