Gene Synpcc7942_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2550 
Symbol 
ID3775143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2628487 
End bp2629560 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content57% 
IMG OID637801000 
Producthypothetical protein 
Protein accessionYP_401567 
Protein GI81301359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.358793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTC CCAAATTTGC CCTGTTTGAG CAGGGGCTAC CCCTTGGCCG AGCAACGGAA 
GCTGAGCGGC TTCAGCACTG TCTGGAACAG GATGGTGATT GTCTGATTGC CGGTGTGCCC
CGCAGTGGTC GTACTGCCCT CGTACGAGCA GTGACCCAGG TACTGGGCGG TTATTGCCTC
GAAGTCGATT GCCTACGAGC AACCAATAAT CCTCGCTTCC TAGCCCTCTA TCTTGATGCG
ATCGCCACTG CCTTTACGGC TCCACCAGAG CGCGACCAGC TACGGGAGTG GGCCGCTGAG
CATCGGGTGG GTATTCAAGA GAGCGCCACC ACATTCAAAT TTGAACTGGG GGCTAGTAGC
CGCGAACGGC AGCTTAGTCA TGCCATTTTG GCGTTACCGC AACTCTTGGC TGAGCGCTTT
GAGCAGCGCG TGGTGGTGAT GTTCCGCAAC TTTAGCCATC TCCAGACTTG GGACCGGAAG
GGGCATTGGG AGACGCAGCT CCGCAGCGAA ATTGCTCGGC AGACACAGGT TTGCTATGCC
TTGATTGCCA CGGCGGCTGA ACCTTGGGCG ATCGCCAGTG GACTGGAAAT TATTACGCTC
CATCCCCTCA GTCAAGCGAC TGTCGAGCAG TGGCTCAATC AGCAATTTGC CGATTGGGGT
CGCAGCTTTA GTCCAGACGC CATTCAAGCA TTTTGGGCAG CAACCCAAGG CCATCCGGGA
GAGACAGAAA CCCTAGCGCG GCGACTCTGG CTGCTGCAAC CCAGCCCGAC TATCGAGCGA
TCGCAGGTGG AGGTGGCGAT CGCTTCACTC TTGGAAGATC TGGCGCTGAC CTTCGAGTCG
CTATTGCTGC TGCTACCCAC GAGTCAGGTG CGACTCCTGG AGAGTTTGGC GATCGACCCA
ACCTCTAGTC CCCAGGCCGG TCACTACATC CAAAAACACC AACTCTCTCG GGGTGGTGGT
TTGCAAGGTG CCTTGAACAG CTTGATGCAG AAGGGCCTGA TCTATGGTCC TGAGTCAGGG
TATCGCTTAG CGCTGCCGCT GTTTGGGCAA TGGCTACAAC GGCGAGTCGG CTAA
 
Protein sequence
MSIPKFALFE QGLPLGRATE AERLQHCLEQ DGDCLIAGVP RSGRTALVRA VTQVLGGYCL 
EVDCLRATNN PRFLALYLDA IATAFTAPPE RDQLREWAAE HRVGIQESAT TFKFELGASS
RERQLSHAIL ALPQLLAERF EQRVVVMFRN FSHLQTWDRK GHWETQLRSE IARQTQVCYA
LIATAAEPWA IASGLEIITL HPLSQATVEQ WLNQQFADWG RSFSPDAIQA FWAATQGHPG
ETETLARRLW LLQPSPTIER SQVEVAIASL LEDLALTFES LLLLLPTSQV RLLESLAIDP
TSSPQAGHYI QKHQLSRGGG LQGALNSLMQ KGLIYGPESG YRLALPLFGQ WLQRRVG