Gene Synpcc7942_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2532 
Symbol 
ID3775125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2612990 
End bp2613889 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID637800982 
Producthypothetical protein 
Protein accessionYP_401549 
Protein GI81301341 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.236123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG CAGCAGTACC CGGTCAGGTT TGGACTTGGC AGGGTCACCA GATCTATTAC 
GTGCAAGCTG GGGAGACAGC AGGCGATCGC CCGCCTTTAT TGTTGGTGCA TGGCTTTGGT
GCCTCAACCG ACCACTGGTG GAAAAATATT GCAGACCTAC AGGCAGACTT CCAAGTCTGG
GCCATTGACC TGCTGGGCTT TGGTCGCTCC GCCAAACCGG CGATTGACTA CAGCGGTCAA
CTCTGGCAAC AGCAGCTCAC GGATTTTATT CAAACCGTCA TCGGTCAGCC TGCGATCGTG
GCGGGTAACT CTCTGGGAGG ATACGCTGCC CTCTGTGCGG CTGCCGCTGC TTCAGATTGG
GTCAAGGGGG TTGTGTTGCT GAATAGTGCT GGCCCCTTCA CGCCCGATGC GCCGCCCCCC
GAGCCCTCGC CCTTGCAAAA ATTCTGGCGA TCGCTGCTGC GTGGCCTCAC CCGCCAGCCC
TGGGCCGTTT GGTTAGTCTT CAAGAATTTG CAGCGCCCCC AAACGATTCG CCGCACCCTC
GAAAAGGTCT ACTGCGATCG CAGTGCCGTC ACCGATGATC TCGTTGAAGC GATTCGCCGT
CCTTCCCTCG ATCCGGGCGC CTTTGAGGTG TTTCGCTCGG TCTTCCGAAC GCCCCAAGGT
GAACCCGTTG ATCAGCTCCT AGCACGACTC ACCTGTCCGT TGCTCTTGAT CTGGGGGAGC
GGCGATCCCT GGATGAATTG CCAGCAGCGC AGTCAGCAGT TCCAGCGCTA TGCTCGCAAC
CTGACAGAGC ATTTTCTCGA AGCGGGCCAT TGCCCCCACG ATGAAGTACC TGACCAAGTC
GATCGCTTGA TTCGGGAGTG GGTAGAGCAG GCGATCACGC CGCAGTCACT GTGCTGTTAG
 
Protein sequence
MPIAAVPGQV WTWQGHQIYY VQAGETAGDR PPLLLVHGFG ASTDHWWKNI ADLQADFQVW 
AIDLLGFGRS AKPAIDYSGQ LWQQQLTDFI QTVIGQPAIV AGNSLGGYAA LCAAAAASDW
VKGVVLLNSA GPFTPDAPPP EPSPLQKFWR SLLRGLTRQP WAVWLVFKNL QRPQTIRRTL
EKVYCDRSAV TDDLVEAIRR PSLDPGAFEV FRSVFRTPQG EPVDQLLARL TCPLLLIWGS
GDPWMNCQQR SQQFQRYARN LTEHFLEAGH CPHDEVPDQV DRLIREWVEQ AITPQSLCC