Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2531 |
Symbol | tsf |
ID | 3775124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2612241 |
End bp | 2612906 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800981 |
Product | elongation factor Ts |
Protein accession | YP_401548 |
Protein GI | 81301340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.339571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAAA TTAGTGCAAA GCTCGTTAAG GAGCTCCGGG AAAAGACCGG CGCTGGCATG ATGGATTGCA AAAAGGCGCT GAACGAAAAC GACGGCGACC TGCAAAAAGC GATCGAATGG CTGCGTCAGA AAGGGATTGC TTCGGCTGAG AAGAAATCGG GCCGCACCGC AGCTGAAGGG TTGGTTGGCA GCTACATCCA CACCGGCGGC CGTGTCGGCG TGCTGGTTGA AGTCAACTGC GAAACCGACT TCGTGGCTCG TGGCGATAAA TTCCAAGAGC TCGTCCGCAG CATTGCCATG CAAATTGCGG CTTGCCCGAA CGTGGAATTT GTCAAAGTCG AAGACATCCC GGCTGAAATT GCTGAGCGGG AAAAAGCGAT CGAAATGGGT CGTGACGACT TGGCCAACAA GCCGGAAAAT ATCCGCGAGA AAATCGTGGT GGGCCGGATT GAAAAACGAC TGAAAGAGTT GACGCTGCTG GATCAGCCCT ACATCCGCGA CCCCAACATC TCGGTGGCTG AGCTGGTGAA ACAGTCGATC GCTGAATTGG GTGAAAACAT CCAAGTGCGT CGCTTTACCC GCTTTGTCCT CGGTGAAGGC ATTGAGAAAG CTGAGAGCGA TTTTGCTGCC GAAGTGGCCG CTCAAGCAGC AGCTGCCCAA AGCTAA
|
Protein sequence | MAEISAKLVK ELREKTGAGM MDCKKALNEN DGDLQKAIEW LRQKGIASAE KKSGRTAAEG LVGSYIHTGG RVGVLVEVNC ETDFVARGDK FQELVRSIAM QIAACPNVEF VKVEDIPAEI AEREKAIEMG RDDLANKPEN IREKIVVGRI EKRLKELTLL DQPYIRDPNI SVAELVKQSI AELGENIQVR RFTRFVLGEG IEKAESDFAA EVAAQAAAAQ S
|
| |