Gene Synpcc7942_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2531 
Symboltsf 
ID3775124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2612241 
End bp2612906 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content54% 
IMG OID637800981 
Productelongation factor Ts 
Protein accessionYP_401548 
Protein GI81301340 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.339571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA TTAGTGCAAA GCTCGTTAAG GAGCTCCGGG AAAAGACCGG CGCTGGCATG 
ATGGATTGCA AAAAGGCGCT GAACGAAAAC GACGGCGACC TGCAAAAAGC GATCGAATGG
CTGCGTCAGA AAGGGATTGC TTCGGCTGAG AAGAAATCGG GCCGCACCGC AGCTGAAGGG
TTGGTTGGCA GCTACATCCA CACCGGCGGC CGTGTCGGCG TGCTGGTTGA AGTCAACTGC
GAAACCGACT TCGTGGCTCG TGGCGATAAA TTCCAAGAGC TCGTCCGCAG CATTGCCATG
CAAATTGCGG CTTGCCCGAA CGTGGAATTT GTCAAAGTCG AAGACATCCC GGCTGAAATT
GCTGAGCGGG AAAAAGCGAT CGAAATGGGT CGTGACGACT TGGCCAACAA GCCGGAAAAT
ATCCGCGAGA AAATCGTGGT GGGCCGGATT GAAAAACGAC TGAAAGAGTT GACGCTGCTG
GATCAGCCCT ACATCCGCGA CCCCAACATC TCGGTGGCTG AGCTGGTGAA ACAGTCGATC
GCTGAATTGG GTGAAAACAT CCAAGTGCGT CGCTTTACCC GCTTTGTCCT CGGTGAAGGC
ATTGAGAAAG CTGAGAGCGA TTTTGCTGCC GAAGTGGCCG CTCAAGCAGC AGCTGCCCAA
AGCTAA
 
Protein sequence
MAEISAKLVK ELREKTGAGM MDCKKALNEN DGDLQKAIEW LRQKGIASAE KKSGRTAAEG 
LVGSYIHTGG RVGVLVEVNC ETDFVARGDK FQELVRSIAM QIAACPNVEF VKVEDIPAEI
AEREKAIEMG RDDLANKPEN IREKIVVGRI EKRLKELTLL DQPYIRDPNI SVAELVKQSI
AELGENIQVR RFTRFVLGEG IEKAESDFAA EVAAQAAAAQ S