Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2505 |
Symbol | |
ID | 3774525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2586130 |
End bp | 2586786 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800954 |
Product | caffeoyl-CoA O-methyltransferase |
Protein accession | YP_401522 |
Protein GI | 81301314 |
COG category | [R] General function prediction only |
COG ID | [COG4122] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.929548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0398755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCAAC AAGTCTTTGT CACGGCAGCG ATCGCGGACT ATCTGCAGGC AATGACGCCG CCGGAACCAG CAGTTTTGCA GATGTGGCGG CAACAAACCG CGACTCATGC CGCCGCTAAG TTGGGAATTA CGCCGACCCA ATCGCAATTT TTAGCCTTGC TTGTGCAGAT TGGTGGCTAT CAACGGGTCT TAGAGCTGGG CACGGGCTTG GGCTACAGCG CCCTTGCAAT GGCGATCGCC CTGCCACCAA CCGGCTCGAT TCTGACTCTC GATCGCGATC GCCAAACCAC AGACTTGGCA AGGCAATATT GGGAATCGCT TGGCTTTGGC GATCGCATTC AACTGTTGCA AGGCGAAATT CGTCCCGCCC TCCAGCAGTT GCAACAACAG GGCGATCGCT TCGACTTTAT TTGGATTGAT GCCGATAAGC GCGCCACCGC TGACTATTTC CAAACAGCGC GATCGCTCCT TACTCCCAAG GGATTGATCG CCGTCGATAA CGTGCTCTGG TCTGGTCGAG TTGCTGATCC TGAGGATGGC GATCGCCGCA CTCAAGCCCT GCGCAACTTC AATGCCGCGA TCGCGGCTGA TCCAAACCTT CAGGTCAGTC TGCTGCCGCT CGGAGACGGG ATCACCCTGA TTCGAACCTG CGACTAA
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Protein sequence | MGQQVFVTAA IADYLQAMTP PEPAVLQMWR QQTATHAAAK LGITPTQSQF LALLVQIGGY QRVLELGTGL GYSALAMAIA LPPTGSILTL DRDRQTTDLA RQYWESLGFG DRIQLLQGEI RPALQQLQQQ GDRFDFIWID ADKRATADYF QTARSLLTPK GLIAVDNVLW SGRVADPEDG DRRTQALRNF NAAIAADPNL QVSLLPLGDG ITLIRTCD
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