Gene Synpcc7942_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2505 
Symbol 
ID3774525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2586130 
End bp2586786 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content57% 
IMG OID637800954 
Productcaffeoyl-CoA O-methyltransferase 
Protein accessionYP_401522 
Protein GI81301314 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.929548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0398755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAAC AAGTCTTTGT CACGGCAGCG ATCGCGGACT ATCTGCAGGC AATGACGCCG 
CCGGAACCAG CAGTTTTGCA GATGTGGCGG CAACAAACCG CGACTCATGC CGCCGCTAAG
TTGGGAATTA CGCCGACCCA ATCGCAATTT TTAGCCTTGC TTGTGCAGAT TGGTGGCTAT
CAACGGGTCT TAGAGCTGGG CACGGGCTTG GGCTACAGCG CCCTTGCAAT GGCGATCGCC
CTGCCACCAA CCGGCTCGAT TCTGACTCTC GATCGCGATC GCCAAACCAC AGACTTGGCA
AGGCAATATT GGGAATCGCT TGGCTTTGGC GATCGCATTC AACTGTTGCA AGGCGAAATT
CGTCCCGCCC TCCAGCAGTT GCAACAACAG GGCGATCGCT TCGACTTTAT TTGGATTGAT
GCCGATAAGC GCGCCACCGC TGACTATTTC CAAACAGCGC GATCGCTCCT TACTCCCAAG
GGATTGATCG CCGTCGATAA CGTGCTCTGG TCTGGTCGAG TTGCTGATCC TGAGGATGGC
GATCGCCGCA CTCAAGCCCT GCGCAACTTC AATGCCGCGA TCGCGGCTGA TCCAAACCTT
CAGGTCAGTC TGCTGCCGCT CGGAGACGGG ATCACCCTGA TTCGAACCTG CGACTAA
 
Protein sequence
MGQQVFVTAA IADYLQAMTP PEPAVLQMWR QQTATHAAAK LGITPTQSQF LALLVQIGGY 
QRVLELGTGL GYSALAMAIA LPPTGSILTL DRDRQTTDLA RQYWESLGFG DRIQLLQGEI
RPALQQLQQQ GDRFDFIWID ADKRATADYF QTARSLLTPK GLIAVDNVLW SGRVADPEDG
DRRTQALRNF NAAIAADPNL QVSLLPLGDG ITLIRTCD