| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2503 |
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| Symbol | |
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| ID | 3774523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2584495 |
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| End bp | 2585460 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637800952 |
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| Product | protochlorophyllide oxidoreductase |
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| Protein accession | YP_401520 |
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| Protein GI | 81301312 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0476532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00139691 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAGA CGCAGCAACC CACTGTCATC ATTACGGGCG CTTCCTCGGG CGTGGGTCTC
TACGGTGCGA AGGCGCTGGC AGCCCGTGGC TGGCACGTGG TGATGGCTTG CCGCAACCTG
CAGAAAGCAG CTGAGGCCGC CAAGTCCTTG GGAATTAACC CCGAGAACTA CAGCCTGATG
GAAATTGATC TCGGTTCGCT GGCAAGTGTG CGTCGCTTTG TCGATCAGTT TCGTGCCACA
GGTCGCAGCC TTGATGCATT GGTCTGCAAT GCCGCTGTCT ATCTGCCGCG CTTAAAAGAG
CCGCAACGCA GTCCCGAAGG CTACGAAATT TCCGTGGCAA CCAATCACTT CGGTCACTTC
TTGCTCTGCA ATCTCCTGCT GGATGATTTG AAGCGATCGC CCGCTCCTGA AAAACGCTTG
GTGATCCTTG GCACTGTGAC GGCTAACTCC AAGGAACTGG GTGGCAAAAT TCCGATTCCG
GCACCGGCGG ATCTCGGTAA CCTTGAGGGA CTAGAAGCTG GTTTCAAAGC CCCGATCGCG
ATGATCGACG GCAAGAAATT CAAGCCGGGC AAGGCCTACA AAGACAGCAA GCTCTGCAAC
ATGATCACGA CGCGGGAGCT ACATCGCCGC TTCCACGACA GCACCGGCAT CGTCTTCAGC
TCGCTCTATC CGGGCTGCGT TGCTGATACA CCGCTGTTCC GCAACACGCC TAAGCTGTTC
CAAAAAATCT TCCCGTGGTT CCAGAAGAAC ATCACGGGCG GCTACGTCAC CCAAGAACTG
GCCGGTGAAC GGGTTGCACA AGTCGTTGCT GATCCAGAAT TCAAAACCTC TGGCGTCCAC
TGGAGCTGGG GTAACCGCCA GCAAAAGGAT CGCCAGTCCT TTGTCCAGGA ACTTTCTGAT
AAAGCCAGCG ACGATCGCAC AGCACAACGC CTCTGGGATT TGAGCGCCAA ACTCGTCGGT
CTCTAG
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| Protein sequence | MSETQQPTVI ITGASSGVGL YGAKALAARG WHVVMACRNL QKAAEAAKSL GINPENYSLM
EIDLGSLASV RRFVDQFRAT GRSLDALVCN AAVYLPRLKE PQRSPEGYEI SVATNHFGHF
LLCNLLLDDL KRSPAPEKRL VILGTVTANS KELGGKIPIP APADLGNLEG LEAGFKAPIA
MIDGKKFKPG KAYKDSKLCN MITTRELHRR FHDSTGIVFS SLYPGCVADT PLFRNTPKLF
QKIFPWFQKN ITGGYVTQEL AGERVAQVVA DPEFKTSGVH WSWGNRQQKD RQSFVQELSD
KASDDRTAQR LWDLSAKLVG L
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