Gene Synpcc7942_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2499 
Symbol 
ID3774519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2579715 
End bp2581055 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content59% 
IMG OID637800948 
ProductBand 7 protein 
Protein accessionYP_401516 
Protein GI81301308 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0504738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00345861 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCTGC TCCCGCAATA TTCCCCGCTG GTGCTAGCGC AATTTGAATC TCAGCCGTCC 
AGCCGTAATA CCGGACAAGA AAGTGACTGG GTGGGCGGCA CCCTCGGCTT TGGGATTGTT
GGATTCCTTG TCCTGTTTGT CATCCTCAAA TCCTGCCTGC GCATTTGTAA CCCCAACGAA
ATTCTGATTG TGTCGGGGCG AAAGCATCGC AATCCCAAAG GGGAGATGGT GGGCTACCGT
GTGCTGTTTG GTGGACGGAC GCTGACGATC CCGGTGATCG AAACTGTCAA GCGCATGGAC
GTGACTACGA TGCCCGTACC GGTTGAGGTG ACTAATGCCT ACGCCAAGGG CGGCACACCG
ATCAATATCC AAGCGATCGC CAACGTCAAA GTTTCAACGG ATCCCCGCTT GGTCGGCAAT
GCGATCGAAC GCTTCCTCGA TCGCAATCGC TCTGAAATTG CCCGCGTCGC CCGCGAAACC
CTAGAGGGCA ACTTACGAGG GGTGGTCGCG ACCCTCACTC CTGAAGAGGT CAATGAAGAC
CGGCTGCGGT TCGCGGAACG GATTGCTGAG GATGTCAGCC ACGATCTCTC GAAATTAGGG
CTGCGGTTGG ACACGCTCAA AATTCAAAGT GTGGCCGACG ATGTGGACTA CCTCAAGTCA
ATTGGTCGTC GTCGCATTGC CCAGATCACT CGCGATGCAG AGATTGCTGA GGCCGAAGCC
CTAGGGGAAG CCGATCGCCG CGAGGCCGAT GCCCAGCAGC AGGCAGAAGT TGCTCGCGCC
CAGGCGGCAA CGGTGGTGCA GCAGCGCCAG AACGAACTGC GCAAAATCAA GGCGCAACTC
GATCAGCAAG TCCGCTCCGA GGAAGAACGG ACAACCGCCG CCGCTAAGGA AGCTCGTGCT
CGGGCGGAGC AGCGCCTCCA ATCGCTACGG GCGGAGCTCG AAAAACTCCG GCTAGAAGCC
GATGAGGTCT TACCTGCCGA AGCTCAACGG GTGGCCAAGA CCCTGCAAGC CCGCGGTAGT
GCGGCGGTGC TGGCTGAGAA TGCCAAAGCG GCTGCAGAAG TGAGCGATCG CCTCAGTCAA
GTCTGGCGAT CAGCAGGCCC CGAAGCGGCG GAACTCTTCT TGATTCAACA GATTGAAATG
GTGCTGCGAG AAGCGGCGCA AATTCCCGGA CGGCTGCACC TCCACAAGGT TCGGGTCGTC
GATGGCGGCG ATGGCCAAGC CCTAGCCCGC TTGATTAATG CCTATCCAGA AATTGTCCAG
CAGTTCCTAC AGAGGGTGGA CTCCACCTTG GGGCTGGATG TGATCGGAAC CCTGAGCCGT
CGTCCTGGAG GTGAAGTCTA A
 
Protein sequence
MSLLPQYSPL VLAQFESQPS SRNTGQESDW VGGTLGFGIV GFLVLFVILK SCLRICNPNE 
ILIVSGRKHR NPKGEMVGYR VLFGGRTLTI PVIETVKRMD VTTMPVPVEV TNAYAKGGTP
INIQAIANVK VSTDPRLVGN AIERFLDRNR SEIARVARET LEGNLRGVVA TLTPEEVNED
RLRFAERIAE DVSHDLSKLG LRLDTLKIQS VADDVDYLKS IGRRRIAQIT RDAEIAEAEA
LGEADRREAD AQQQAEVARA QAATVVQQRQ NELRKIKAQL DQQVRSEEER TTAAAKEARA
RAEQRLQSLR AELEKLRLEA DEVLPAEAQR VAKTLQARGS AAVLAENAKA AAEVSDRLSQ
VWRSAGPEAA ELFLIQQIEM VLREAAQIPG RLHLHKVRVV DGGDGQALAR LINAYPEIVQ
QFLQRVDSTL GLDVIGTLSR RPGGEV