Gene Synpcc7942_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2497 
Symbolndk 
ID3774517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2577916 
End bp2578371 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content56% 
IMG OID637800946 
Productnucleoside diphosphate kinase 
Protein accessionYP_401514 
Protein GI81301306 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0537474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0011549 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGTGG AACGCACATT TATTGCCATC AAGCCCGATG GCGTTCAGCG GGGTTTGGTC 
GGTACGATCA TCGGCCGCTT TGAGCAAAAA GGCTTCAAAC TGGTGGGCCT AAAGCAGCTG
AAGCCCAGTC GCGAGCTGGC CGAACAGCAC TATGCTGTCC ACCGCGAGCG CCCCTTCTTC
AATGGCCTCG TCGAGTTCAT CACCTCTGGG CCGATCGTGG CGATCGTCTT GGAAGGCGAA
GGCGTTGTGG CGGCTGCTCG CAAGTTGATC GGCGCTACCA ATCCGCTGAC GGCAGAACCG
GGCACCATCC GTGGTGATTT TGGTGTCAAT ATTGGCCGCA ACATCATCCA TGGCTCGGAT
GCAATCGAAA CAGCACAACA GGAAATTGCT CTCTGGTTTA GCCCAGCAGA GCTAAGTGAT
TGGACCCCCA CGATTCAACC CTGGCTGTAC GAATAA
 
Protein sequence
MSVERTFIAI KPDGVQRGLV GTIIGRFEQK GFKLVGLKQL KPSRELAEQH YAVHRERPFF 
NGLVEFITSG PIVAIVLEGE GVVAAARKLI GATNPLTAEP GTIRGDFGVN IGRNIIHGSD
AIETAQQEIA LWFSPAELSD WTPTIQPWLY E