| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2495 |
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| Symbol | |
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| ID | 3774515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2575746 |
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| End bp | 2576687 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800944 |
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| Product | integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD |
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| Protein accession | YP_401512 |
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| Protein GI | 81301304 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.799542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00275887 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTGGT TGCAACCGCT GATCAATGGT CTGGCCATCG GGGGCGTCTA TGCCCTGTTT
GCCTTGGGGT ATACCTTGGT CTTTTCGATC CTGGGGGTCA TTAACTTTGC CCATGGTGCC
GTTTTTACCC TCGGTGCCTA CCTGACTTAC GCTCTAGTGG GTGGGCGTTT CAGCTTCAAC
GGGTTGCTCG CCAATGCCGC GCTGCCCTTC AGTTTGCCGT TCGCCTTGGC TCTGCTGCTC
GGCAGTTTGC TGGCCGGCGG TGCCAGCCTC TTGATTGAGC AAGTGGCCTT TCGTCCCCTG
CGCCGCCGCC AAGCGGATCC CCTCCTAACC CTGATCTCCA GCCTTGGCGT GGCGGTGTTT
ATCGTCAATT TGATTCAAAT CTTGGTGGGA GCCGAGATTT ACACCTTCCC AAGCAACATC
TACGGCGACC TACCCAGTGC CATCAACTTA GGCAGCAGCG ATCGCCCGAT CCAGATCCGC
ACGGTGCAAA TCATCCTGTT TGTCGTGGCG ATCGCGATGT TCAGTCTGCT GACTTGGCTG
ATCAACGGCA CCCGCGTTGG CCATGCCCTG AAAGCTGTTG CCGAAGATGC CACCACCGCT
AGCCTGCTGG GCATCGATCC CGATCGCTAC ATCCGGCTGA CCTTCTTCCT GAGTGGCGTC
CTTGGTGGTT TGGCGGGCAC CTTGGTCGGT ACCAGTGTCA GTATCACCGG CCCCTATTTC
GGGATTGCCT ACGGGCTGAA AGGCCTGAGT GTGATGGTCT TAGGTGGACT CGGCAATATT
CCCGGCACGA TTGCGGGCGG CTTGTTGTTG GGTCTGGCGG AAGCTTGGGT GCCGCCACAA
TGGTCGGGCT ATCGCGATGC CGTTGCCTTT GCGCTGCTAT TTGCCATGCT CTTGATCCGT
CCCCAGGGCT TGTTTAGTCG TGCTCGGACA GAGAAGGTGT AG
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| Protein sequence | MDWLQPLING LAIGGVYALF ALGYTLVFSI LGVINFAHGA VFTLGAYLTY ALVGGRFSFN
GLLANAALPF SLPFALALLL GSLLAGGASL LIEQVAFRPL RRRQADPLLT LISSLGVAVF
IVNLIQILVG AEIYTFPSNI YGDLPSAINL GSSDRPIQIR TVQIILFVVA IAMFSLLTWL
INGTRVGHAL KAVAEDATTA SLLGIDPDRY IRLTFFLSGV LGGLAGTLVG TSVSITGPYF
GIAYGLKGLS VMVLGGLGNI PGTIAGGLLL GLAEAWVPPQ WSGYRDAVAF ALLFAMLLIR
PQGLFSRART EKV
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