| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2494 |
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| Symbol | |
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| ID | 3774514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2574819 |
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| End bp | 2575742 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637800943 |
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| Product | putative branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | YP_401511 |
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| Protein GI | 81301303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.272138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00284641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAATG TGGTCGCCAC CTACGGGTTT CTGTTGGTTT CGATGCTGCT GGGCGCGACG
CTGGGTCTGT CAGTCTATCT GCCGCTGATG GCAGGACAAC TATCCTTGGC ATCGCCCGCT
TTCTATGCTC TGGGCGGCTA TCTGGCGGCC ATCCTCTCGA CGAAAGGTCT GACTGCCAGC
CCTGAATACA GTGTTGGGGC TTTGCTGCTA GAGATGGGTC TTGCAGCGAT CGCGGCGGCG
GTTCTCGCCT TTCTGGTCGG CTATCCGGTG CTGCGGCTGC GCGGCATTTA TCTGGCAATC
GCCACGATCG CGCTCGTGGA AATTGTGCGG GTTGTCGCAC TGAATCTCTC GATCACGGGC
GGTGCCGTCG GCATTTTTGG GATTCCCCAG CCCTTTAGCT CGGCGGTTGG CTACCTCTGG
ATTGCCTTGC CGCTGCTGCT GATCGCAGTT GCTGCCTGCT GGCGCCTGCA ACAGGTGCGG
ACTGGCCTAG TGCTGGCCGC AATCCGTGAA GATGAACTCG CAGCCAGTGC GATCGCGGTC
AACACAACCC GCTACAAGGT GCTGGCCTTT GTGCTGGGGG CGGTTCTGGC CAGCCTTGTC
GGAGCGGTTA GCGCCCACTT CCTCAATACC TGGAACCCGC GCCAAGGCAC CTTTGATGCC
AGCATCACCT TTCTGGCCTT TGTGCTGATC GGCGGATCGC GCAGTGCCTT TGGCCCTGTG
TTGGGCGGGA TGGTGCTGAC TGCCTTGCCA GAACTATTGC GGGCGATCGG TTCGGTGCCG
GGCTTGTGGC CGGGACTGAG TCGCCTCTTG CAGGACGGTC GCCTGTTGAT TTTTGGGCTG
CTGCTGGTCT TGGGCAGCAT CTATTTCCCG CAGGGATTGA TCAAGCCCCG CGCCAGCCAG
CCACGCCGAC GGAGGACCTC ATGA
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| Protein sequence | MGNVVATYGF LLVSMLLGAT LGLSVYLPLM AGQLSLASPA FYALGGYLAA ILSTKGLTAS
PEYSVGALLL EMGLAAIAAA VLAFLVGYPV LRLRGIYLAI ATIALVEIVR VVALNLSITG
GAVGIFGIPQ PFSSAVGYLW IALPLLLIAV AACWRLQQVR TGLVLAAIRE DELAASAIAV
NTTRYKVLAF VLGAVLASLV GAVSAHFLNT WNPRQGTFDA SITFLAFVLI GGSRSAFGPV
LGGMVLTALP ELLRAIGSVP GLWPGLSRLL QDGRLLIFGL LLVLGSIYFP QGLIKPRASQ
PRRRRTS
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