Gene Synpcc7942_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2492 
Symbol 
ID3774512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2573355 
End bp2574068 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content58% 
IMG OID637800941 
ProductATPase 
Protein accessionYP_401509 
Protein GI81301301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00256607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAGC CCCTGCTGCA ACTGAGTCAG ATCGCAGTGA ACTATGGGGC TGTGGTCGCC 
CTGACTGACT TGACGCTCGA GATTTTTCCG GGCGAGATCG TGGCGCTAAT CGGGGCGAAT
GGCGCCGGCA AAAGCACGAC CCTACGGGCA ATTTCTCGCC TTGTGCCGCT TCAACAAGGC
CGGATCTACT ACGACCAGCA GGATCTGGGT TTGATCCCAG CGCCGCAACT GGTGGGACGA
GGACTAGCGC ATTGTCCTGA GGGTCGCCGT GTCTTGGCTC GTCAGAGTGT GCGGATCAAT
CTGGAACTTG GAGCTTACTG TCGGCGCGAT CGCATTGGAA TTCAAACGGA TCTAGAGCTG
CAATTCGATC GCTTTCCGCG CCTGCGGGAA CGACAGAATC AACCGGCTGG TACCCTCAGT
GGCGGCGAGC AACAGATGCT GGCGATCGCC CGAGCGTTGA TGAGTCGTCC TCGCTTGCTG
CTGTTAGATG AACCGAGCTT GGGCCTAGCT CCTCAGATCG TCCAAGAGAT TTTTAGCGTC
ATCCGCAGCT TGCGTGAGCA AGGTATGACG ATTCTCTTGG TTGAGCAGAA TGCTACTTTG
GCGCTCCAGA CTGCCGATCG CGGCTACGTT CTGGAGGCAG GACAACTGCT CTTCTCAGGG
CCAGCAGCGG ATCTGCTGAT TGATCCCCGC GTCAAGCAAG CCTATCTGGG CTAG
 
Protein sequence
MSEPLLQLSQ IAVNYGAVVA LTDLTLEIFP GEIVALIGAN GAGKSTTLRA ISRLVPLQQG 
RIYYDQQDLG LIPAPQLVGR GLAHCPEGRR VLARQSVRIN LELGAYCRRD RIGIQTDLEL
QFDRFPRLRE RQNQPAGTLS GGEQQMLAIA RALMSRPRLL LLDEPSLGLA PQIVQEIFSV
IRSLREQGMT ILLVEQNATL ALQTADRGYV LEAGQLLFSG PAADLLIDPR VKQAYLG