Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2492 |
Symbol | |
ID | 3774512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2573355 |
End bp | 2574068 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637800941 |
Product | ATPase |
Protein accession | YP_401509 |
Protein GI | 81301301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00256607 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGAGC CCCTGCTGCA ACTGAGTCAG ATCGCAGTGA ACTATGGGGC TGTGGTCGCC CTGACTGACT TGACGCTCGA GATTTTTCCG GGCGAGATCG TGGCGCTAAT CGGGGCGAAT GGCGCCGGCA AAAGCACGAC CCTACGGGCA ATTTCTCGCC TTGTGCCGCT TCAACAAGGC CGGATCTACT ACGACCAGCA GGATCTGGGT TTGATCCCAG CGCCGCAACT GGTGGGACGA GGACTAGCGC ATTGTCCTGA GGGTCGCCGT GTCTTGGCTC GTCAGAGTGT GCGGATCAAT CTGGAACTTG GAGCTTACTG TCGGCGCGAT CGCATTGGAA TTCAAACGGA TCTAGAGCTG CAATTCGATC GCTTTCCGCG CCTGCGGGAA CGACAGAATC AACCGGCTGG TACCCTCAGT GGCGGCGAGC AACAGATGCT GGCGATCGCC CGAGCGTTGA TGAGTCGTCC TCGCTTGCTG CTGTTAGATG AACCGAGCTT GGGCCTAGCT CCTCAGATCG TCCAAGAGAT TTTTAGCGTC ATCCGCAGCT TGCGTGAGCA AGGTATGACG ATTCTCTTGG TTGAGCAGAA TGCTACTTTG GCGCTCCAGA CTGCCGATCG CGGCTACGTT CTGGAGGCAG GACAACTGCT CTTCTCAGGG CCAGCAGCGG ATCTGCTGAT TGATCCCCGC GTCAAGCAAG CCTATCTGGG CTAG
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Protein sequence | MSEPLLQLSQ IAVNYGAVVA LTDLTLEIFP GEIVALIGAN GAGKSTTLRA ISRLVPLQQG RIYYDQQDLG LIPAPQLVGR GLAHCPEGRR VLARQSVRIN LELGAYCRRD RIGIQTDLEL QFDRFPRLRE RQNQPAGTLS GGEQQMLAIA RALMSRPRLL LLDEPSLGLA PQIVQEIFSV IRSLREQGMT ILLVEQNATL ALQTADRGYV LEAGQLLFSG PAADLLIDPR VKQAYLG
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