Gene Synpcc7942_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2470 
Symbol 
ID3774490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2551697 
End bp2552464 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content57% 
IMG OID637800919 
Producthypothetical protein 
Protein accessionYP_401487 
Protein GI81301279 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000599046 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGACG CCCCCAATCA CAGCTCTCTT AGTTTTTGGC AACGGCTGCG GCAGGATTTC 
AAAAATGATT TGATCGCCGG TTTGCTGGTG GTCATTCCCC TAGCAACCAC AATCTGGCTG
ACGGCAGTGG TCTCCCGCTG GGTTGTCAAC CTGCTGACAG GAATTCCCAA ACAGGTCAAT
CCCTTCAATG ACCTCGATCC TCTGCTCACC AACCTAATCA ACCTAGGGGT GGGTCTGACC
GTCCCCCTGA CCGCCATCTT GGTGATCGGG CTGATGGCGC GCAACATCGT CGGTCGCTTC
CTGCTGGATT TTGGCGAGCG CACCCTGCAG GCGATTCCCC TCGCAGGATC GGTCTACAAA
ACCCTCAAGC AACTGCTCGA AACGGTCCTG AAGGACAACG GCAACCGCTT TCGGCGCGTA
GTGTTAGTGG AATATCCGCG CAAGGGCCTT TGGTCAGTCG GATTCGTCAC TGGCATCGTC
AGCGATGCGA TTCAGGCCAA GCGCCCAGAT GCTGCCCTCG TCAGTGTCTT TATCCCTTCG
ACGCCCAATC CCACCACGGG CTGGTATGCA GTGGTCTGCG AAGAGGAGGT GCTAACCCTA
GATATGTCTG TTGAGGATGC CTTCAAAATT CTGATTTCCG GTGGCATCGT CTCGCCCAAA
GGCAATTCGC CAGCCGCTCC CTTGAATAGC CTGCCGGAAG CGGTAGAGAA AGTGCTGGTT
GAGGCCGCCA GCAGCAGTGG CAAGGGCGAA GACGAGAGCG GTCGCTAA
 
Protein sequence
MSDAPNHSSL SFWQRLRQDF KNDLIAGLLV VIPLATTIWL TAVVSRWVVN LLTGIPKQVN 
PFNDLDPLLT NLINLGVGLT VPLTAILVIG LMARNIVGRF LLDFGERTLQ AIPLAGSVYK
TLKQLLETVL KDNGNRFRRV VLVEYPRKGL WSVGFVTGIV SDAIQAKRPD AALVSVFIPS
TPNPTTGWYA VVCEEEVLTL DMSVEDAFKI LISGGIVSPK GNSPAAPLNS LPEAVEKVLV
EAASSSGKGE DESGR