Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2470 |
Symbol | |
ID | 3774490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2551697 |
End bp | 2552464 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800919 |
Product | hypothetical protein |
Protein accession | YP_401487 |
Protein GI | 81301279 |
COG category | [S] Function unknown |
COG ID | [COG2928] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000000599046 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGACG CCCCCAATCA CAGCTCTCTT AGTTTTTGGC AACGGCTGCG GCAGGATTTC AAAAATGATT TGATCGCCGG TTTGCTGGTG GTCATTCCCC TAGCAACCAC AATCTGGCTG ACGGCAGTGG TCTCCCGCTG GGTTGTCAAC CTGCTGACAG GAATTCCCAA ACAGGTCAAT CCCTTCAATG ACCTCGATCC TCTGCTCACC AACCTAATCA ACCTAGGGGT GGGTCTGACC GTCCCCCTGA CCGCCATCTT GGTGATCGGG CTGATGGCGC GCAACATCGT CGGTCGCTTC CTGCTGGATT TTGGCGAGCG CACCCTGCAG GCGATTCCCC TCGCAGGATC GGTCTACAAA ACCCTCAAGC AACTGCTCGA AACGGTCCTG AAGGACAACG GCAACCGCTT TCGGCGCGTA GTGTTAGTGG AATATCCGCG CAAGGGCCTT TGGTCAGTCG GATTCGTCAC TGGCATCGTC AGCGATGCGA TTCAGGCCAA GCGCCCAGAT GCTGCCCTCG TCAGTGTCTT TATCCCTTCG ACGCCCAATC CCACCACGGG CTGGTATGCA GTGGTCTGCG AAGAGGAGGT GCTAACCCTA GATATGTCTG TTGAGGATGC CTTCAAAATT CTGATTTCCG GTGGCATCGT CTCGCCCAAA GGCAATTCGC CAGCCGCTCC CTTGAATAGC CTGCCGGAAG CGGTAGAGAA AGTGCTGGTT GAGGCCGCCA GCAGCAGTGG CAAGGGCGAA GACGAGAGCG GTCGCTAA
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Protein sequence | MSDAPNHSSL SFWQRLRQDF KNDLIAGLLV VIPLATTIWL TAVVSRWVVN LLTGIPKQVN PFNDLDPLLT NLINLGVGLT VPLTAILVIG LMARNIVGRF LLDFGERTLQ AIPLAGSVYK TLKQLLETVL KDNGNRFRRV VLVEYPRKGL WSVGFVTGIV SDAIQAKRPD AALVSVFIPS TPNPTTGWYA VVCEEEVLTL DMSVEDAFKI LISGGIVSPK GNSPAAPLNS LPEAVEKVLV EAASSSGKGE DESGR
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