Gene Synpcc7942_2464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2464 
Symbol 
ID3774484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2545468 
End bp2546166 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID637800913 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_401481 
Protein GI81301273 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0988106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000134862 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCGAC AGCAACAGCT TCGTCGCCTT CAGGGAGGTC TGATTGTTTC CTGTCAGGCA 
CCTGCGGATT CTCCCCTGCA TCAGCCAGAG ATCATTGCCG CGATCGCAGT CGCAGCAGTT
CAGCGTGGAG CTGTGGGCAT TCGCTTGGAT ACGCCTGAAC ATGTGCGTGC CGTGCGCGAT
CGCCTACCGG AAACACCAAT TATTGGCCTC TGGAAACGTA CCTTTCCCGA TAGCTCGGTC
TACATTACGC CCCGCTACGT CGAAGCAGAA GCGATCGCGG CGGCCGGAGC CGACATTGTT
GCCTTGGATT GCACCCTGCG CCCCCGCCCG GATGGCGAGG ATTTTTGCCA AATCATTCCG
CGCCTTCAGC AAGAACTCGG CTGTGCCGTG ATGGCCGACA TCGACACTCT AGAAGCAGCG
ATCGCGGCTG CCAAGGCAGG AGCTGATTTA GTCGGAACCA CGCTCTACGG CTACACGGAA
GCTACTCAGG GGCAAACCCC GCCGGGCTGG GATCTGTTAG AGACCGCCGC TCAACAATTG
CCCAATACAC CCGTGATCTG CGAAGGGGGA ATTGCCAGTG CTCAAGCTGC CCGCCAAGCC
TGCGATCGCG GCGCGTTTGC GGTTGTTGTC GGAACGGCGA TTACAGGCAT TGATCTGCAG
GTCCAAGCCT ACGTGACAGC TCTCAATGCA AGGCCCTAG
 
Protein sequence
MDRQQQLRRL QGGLIVSCQA PADSPLHQPE IIAAIAVAAV QRGAVGIRLD TPEHVRAVRD 
RLPETPIIGL WKRTFPDSSV YITPRYVEAE AIAAAGADIV ALDCTLRPRP DGEDFCQIIP
RLQQELGCAV MADIDTLEAA IAAAKAGADL VGTTLYGYTE ATQGQTPPGW DLLETAAQQL
PNTPVICEGG IASAQAARQA CDRGAFAVVV GTAITGIDLQ VQAYVTALNA RP