Gene Synpcc7942_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2458 
Symbol 
ID3774478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2536184 
End bp2538358 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content59% 
IMG OID637800907 
ProductComEC/Rec2-related protein 
Protein accessionYP_401475 
Protein GI81301267 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000361147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000145403 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACCCA CGGCAGTCTA TCTCTGCTGT GCTTTTGCGA TCGCGGGCTT CTTTCTCGCC 
AGCCAGTCGC CTTTGCCCGT CGGCTGGGTC TTTGCTGGCC TCCTCTGGGC CGCGATCGCG
ATCGGTGGCT ATCCCTGCTT GCCCCGCAAA AGTCAGCGCC GCATCCCCTT GCGCTTCTGG
CTTTGGGCAG CGATCGCGCT TTACGCCGCC GGCTTTTGGT TTTACCTACG CTTACCGACA
CCGAGTGCCA CAGACATTAG CCGCTGGGCT GATCAAGGGT CAGGTGTTTT AGTCGGAACG
ATCAGCGATC GCCCACGTCT ACAAACCAAC GGCCAATCCT TCACGCTGAC GGCGCAAACC
TGGTCGCCCA ATCCTGCCGA AACTGAGCTG AGGTTGCCCC CCAGCCAAGG GCTGCAAGGA
CAGGTTGCGG TTCGCTTGAC CCAAGCTGTC ACAGGATTAC AACCCGGTCA GACCGTGGTG
TTGGAAGGGG AATTGCGATC GCTCCAAGCG CCGCGCAATC CTGCCGGTTT CGATCGCCAA
CGCTATCTCC AACGTCAGTC GATTTTTAGT GAATTTCGGG GGCAACTGCT CAAGGAAGAC
AATCCGCCGC TCTGGAGCCT CGAGCCGGTG CGTCGCCGTA TTTTGGCTGC CTTTCAGCAA
GGCTTAGGTT CCGATCAAGG CTCAGCGCTG GCCGCCCTGA GCTTTGGCAA CGGCTTGGCA
CGACTACCAG GCAACCTTCC TGAGGATTTT CTGCGTTGTG GTTTGGCTCA TGCGACGGCT
GCTTCTGGCT TTCAGGTAGC CTTGCTCCTG GGATTGACCT TGGCCTGTTG CCGGGGCCTC
TCGCCCCGTT GGCAAGCCGC GATCGGTACC CTCACGCTGA TCAGTTTTCT CGGCATTGCA
GGCAGTTCTG CATCGCTGTT GCGGGCGTTC TTGATGGGCG AAATTCAGCT CTGGGCACTG
TTGCGTCAGC GATCGCCCCA GACCTTACCG ACCTTGTTAC TGGTCGCGAC CGCGCTGCTG
CTCTGGCAAC CACTCTGGAT TGAGGATCTC GGCTTTCAGT TCAGCTTTCT GGCGACCTTG
GGGCTGGTCG TCAGTGTTCG TCCTATTACT GATCGCTTGG ACTGGCTACC CCCTCGACTG
GCCATCCTGA TTGCCGTGCC ACTGGCCGCC ACACTCTGGA CGCTACCGCT ACAACTGCAC
GCCTTTGGCA CCCTCTCGCC CTACGCGATT CCCGCGAATG TGCTGGTCAC ACCGCTCTTA
GCAAGTTTGG GGATGGGCGG CGTATGGGCC GGTCTGCTCT CGCTGATTTG GCTGCCACTT
GGGAGTGTCG CAGCTTGGCT GCTTAGCGCG CCACTCTGGC TGCTGATTAG CCTAGTCAGT
ACGATCGCCA ATCTGCCTGG GGCAACTTGG GCAACTGGAC AGATTGCGCT GATTGTTGTG
CTGCTCTGCT ATCTCAGTTA TGCACTGCTG CTGACTTGGC CTCGACTGCG CCGCCGCTGG
CGATCGCTGG CCGTGGCGTT GATTGCGATC GTCTTGCTGC CAGGACTGGC GCAAGCAGCG
ACCCAGCAGG AAATTCTGTT TTTGAACAGT GATGGACCCT TGGCTGTCGT GCGCGATCGC
GGTCAGGTGG GTTTAGTCTG CGGAGCGAGC GATCGCAGCT TACGTTGGGA TCTCCAGCCT
TACCTAGAAC AACAGGGCAT CAATCAACTG GACTGGGTCT TGCAGCTGAG CGATCGCTGT
ACCGTTCAGG AGCAATGGCC GATTCGTCAG ATTTTCAGTA GCCAAAGCCT GCAACCAGGG
CAAACGATCC AATGGCCCAA CCTGAAATTA GAGTGGCTAA GTCGCACGCC CAACCTCTGG
CAACTGAGCT GGCAGGGCGA GCAGTGGCTC TGGCTATTTC AACGCGGCAG CGATCGCTGG
AGTTCGCAGG ATTTGCCGCC GTTACCGCCT CAAACTTGGC TTTGGTCAGC CAGCGATCGC
CTCCCTCAGG GCTGGTTACA GTCCGGCCAG ATTCAAGGCT GGATCAGCAG CAGTAGTGCT
CCAACCGGCA TGCATACAAG CGACACCCCA GCCCTGCAGC CCAATGGACG CACACGCCAC
CAAGCTTGGC GTTGGAGTCT TAGGGGATCC TTACAACCAG CGATCGCCCA ACAGGCTCGC
CCCGGACTGC TTTGA
 
Protein sequence
MAPTAVYLCC AFAIAGFFLA SQSPLPVGWV FAGLLWAAIA IGGYPCLPRK SQRRIPLRFW 
LWAAIALYAA GFWFYLRLPT PSATDISRWA DQGSGVLVGT ISDRPRLQTN GQSFTLTAQT
WSPNPAETEL RLPPSQGLQG QVAVRLTQAV TGLQPGQTVV LEGELRSLQA PRNPAGFDRQ
RYLQRQSIFS EFRGQLLKED NPPLWSLEPV RRRILAAFQQ GLGSDQGSAL AALSFGNGLA
RLPGNLPEDF LRCGLAHATA ASGFQVALLL GLTLACCRGL SPRWQAAIGT LTLISFLGIA
GSSASLLRAF LMGEIQLWAL LRQRSPQTLP TLLLVATALL LWQPLWIEDL GFQFSFLATL
GLVVSVRPIT DRLDWLPPRL AILIAVPLAA TLWTLPLQLH AFGTLSPYAI PANVLVTPLL
ASLGMGGVWA GLLSLIWLPL GSVAAWLLSA PLWLLISLVS TIANLPGATW ATGQIALIVV
LLCYLSYALL LTWPRLRRRW RSLAVALIAI VLLPGLAQAA TQQEILFLNS DGPLAVVRDR
GQVGLVCGAS DRSLRWDLQP YLEQQGINQL DWVLQLSDRC TVQEQWPIRQ IFSSQSLQPG
QTIQWPNLKL EWLSRTPNLW QLSWQGEQWL WLFQRGSDRW SSQDLPPLPP QTWLWSASDR
LPQGWLQSGQ IQGWISSSSA PTGMHTSDTP ALQPNGRTRH QAWRWSLRGS LQPAIAQQAR
PGLL