| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2457 |
|---|
| Symbol | glyQ |
|---|
| ID | 3774477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2535240 |
|---|
| End bp | 2536118 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637800906 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_401474 |
|---|
| Protein GI | 81301266 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000472181 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000000290022 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTTC AATCCGTCAT TGCCACGCTC AACCAATTTT GGGCCGATCG CGGTTGCCTG
ATTGCCCAGC CCTACGACAC CGAAAAAGGG GCCGGCACCA TGAATCCGCA CACTTTTCTG
CGGGCGATCG GGCCTGAGCC TTGGGCTGTG GCTTATGTGG AGCCTTGTCG TCGTCCTACT
GATGGTCGCT ACGGCGAAAA TCCCAATCGC TATCAGCACT ACTACCAGTA CCAAGTGCTG
ATCAAGCCCT CACCAGAAGG GATTCAGGAA ACCTATCTTG ACTCACTGAG GGCCTTGGGG
ATTCAGCCCG AGGAACATGA CATCCGCTTT GTCGAAGATA ACTGGGAGTC GCCAACGCTT
GGGGCCTGGG GTGTCGGCTG GGAAGTTTGG CTGGATGGCA TGGAGGTGAC TCAGTTCACC
TACTTCCAGC AGTGCGGCGG CATCGACTGT CGACCTGTGT CGATTGAGAT CACCTACGGT
CTGGAACGGC TGGCGATGTA TTTGCAAAAC GTCGAAGCCT TCACCGAGAT CAAGTGGACC
GATCGCCTCA GCTATGGCGA CGTGCATCTG CAAAGCGAGA TTGAGCAATG CACCTACAAC
TTCGAAGCTT CGACGCCGGA GTTGCTCTTC CAGTTATTTG GTCTTTACGA GCAGGAAGCC
ACCCAACTAA TTGAGAAGGG GCTGGTGCAT CCCAGCTTGG ATTACGTGCT CAAGTGTTCC
CACAGCTTCA ACCTGCTAGA TGCTCGCGGT CTGATTTCGG TGACGGAGCG AACGCGCTAC
ATCGGCCGGA TTCGGAATAT GGCGCGGCAA GTTGCCAAGC TCTATCTGGA ACAGCGCGAG
CAGTTGGGCT TTCCACTGCT GCAAAAAGTG ACAGCCTAG
|
|---|
| Protein sequence | MNFQSVIATL NQFWADRGCL IAQPYDTEKG AGTMNPHTFL RAIGPEPWAV AYVEPCRRPT
DGRYGENPNR YQHYYQYQVL IKPSPEGIQE TYLDSLRALG IQPEEHDIRF VEDNWESPTL
GAWGVGWEVW LDGMEVTQFT YFQQCGGIDC RPVSIEITYG LERLAMYLQN VEAFTEIKWT
DRLSYGDVHL QSEIEQCTYN FEASTPELLF QLFGLYEQEA TQLIEKGLVH PSLDYVLKCS
HSFNLLDARG LISVTERTRY IGRIRNMARQ VAKLYLEQRE QLGFPLLQKV TA
|
|---|
| |