| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2453 |
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| Symbol | |
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| ID | 3774472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2530879 |
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| End bp | 2531958 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800901 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_401470 |
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| Protein GI | 81301262 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.237184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000165118 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTCGGCA TTTTTTCTAA GTTTCTTGGT GGCGATCAAT CGCGCCTTGG GGTGGAAATT
ACCCCAGAGC GGATCAATCT TGCCCACATT GGCCGCAAGG GGAATCGCCT GCAGCTTCAG
GATTTTGTTT CCGTGGAGCT ACCGGATGGG TTGTTTCAAG ACGGGCGCGT GCTAGATAGC
TTCAGCCTGT CCGATCTGCT CCGCACCGCC ATCAACGACA ACCGCATCAG AACCAAAAGA
GTCTCCACTG CGGTGCCAGG ACGAGAGGTG ATCACCCGGC TGCTGCCCAT GCCCGCGGAG
CTCGATGATG CCGAATTGCG CGAGACACTG ATCAATCAAG AAGCTGCTCT GTTCCTGCCC
TTCCCGCGTG AAGAGGCCGA CATCGACTAT CTGAAACTGG ACTATTTTCT GGACGCGGAT
GAGGTCGAAA AGTTGCACGT CCTGCTCGTG GCGACTCGTC GGCAGGTGAC CGATGTCTAC
CTTGATCTCT TTGCCCAAGC TGGCCTGACG CCTGACATTG TGGAAGTTGG GAGCTTTGCG
CTAATCCGAA CGATTCGCGA AGCGCTGCGC CAGTACGGAT TGCAAGAAGC GGTCATTCTC
CTCAACGTGG AATATGACCT CACAGAAATC GTGATTATCG TTGGGGGCGT GCCTCGGTTT
AGCCGCACGA TCGCCATGGG TACTCAGCAG TGGCAGCGGG CTGCAGCCCA AGCTGGTATC
GACAATACAG GACGGGGTAT TGATTTCCTG CAGGGGCGAT CGTTCACATT GCTCGAACCC
CCGGCTGATC TCCTCTCTCA AGCTCTGGCA CGATCGGTCA CCGAGCTCTG TGATGAAGTA
CGGCGATCGG CTGACTTCTA CCTCAGCCAA GAGACCGATA TTGAAGTAGC CAAGCTCTAC
GTTGCAGGTC CAGGCTCAGC CTTGCCAACA CTACCCGAGT TTCTGGGGCA ACGCCTAGGG
CTCCCTGTAG AACTCGTCGA TCCTGTCGAG GGGTTGGGGC TCGAGGTGGC GGAGAACCTT
TATTTGCCAA ATCGCGCTGA TGTGGGCGTG GTGTTGGGCT TAGCCACGCG AGGAGTATAG
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| Protein sequence | MVGIFSKFLG GDQSRLGVEI TPERINLAHI GRKGNRLQLQ DFVSVELPDG LFQDGRVLDS
FSLSDLLRTA INDNRIRTKR VSTAVPGREV ITRLLPMPAE LDDAELRETL INQEAALFLP
FPREEADIDY LKLDYFLDAD EVEKLHVLLV ATRRQVTDVY LDLFAQAGLT PDIVEVGSFA
LIRTIREALR QYGLQEAVIL LNVEYDLTEI VIIVGGVPRF SRTIAMGTQQ WQRAAAQAGI
DNTGRGIDFL QGRSFTLLEP PADLLSQALA RSVTELCDEV RRSADFYLSQ ETDIEVAKLY
VAGPGSALPT LPEFLGQRLG LPVELVDPVE GLGLEVAENL YLPNRADVGV VLGLATRGV
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