| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2452 |
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| Symbol | |
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| ID | 3774471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2530160 |
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| End bp | 2530876 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800900 |
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| Product | Tfp pilus assembly protein PilN-like |
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| Protein accession | YP_401469 |
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| Protein GI | 81301261 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.10086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000461269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTACAGCT TAGACATTAA CTTTCTCAAA GAACGGACAA CCACAGCGCC GCCAGTTACC
ACCTTCGGGA CTGCAGCCGT TGCCACTAAT CCCTCGGAGC GGCTCCCGCT CTGGATTGGG
GTGGGTATCG GCTTGCTTTT GCCTGGGCTG GCACTCGTGG TTACGGCCTT GGCTAACAAT
CGGGTTTCGA CCCTGACTGC TGACAAGGCC GAACTCGAAC AACAAATTCA GCTGGGGCAG
CCAGCAGAAG CCCGCCTCAA GAGCATTCAG GCTGAGATTG AGCAAATCAA TACCGACACC
ACGTCCTTAA TTCAGGTCTT CCCGCAGGTC AAATCCCAGT CTGCTATCCT CACCGACCTG
AGTCGACGGA CCCCGGTGGC AGTTCAGATC AGCAAGATTG AGCAGGCGGG CAAGAAGGTC
ACCCTACAGG GCAGTTCTTC TAACTACGAC TCGGTCAATG ACCTGCTGCT GACCTTGCAG
CAGTCGCGTT TCTTTACAGC TAGCAGCCTG CGGATTGAAG AGGCGAAATT AGGCGCTACC
CCTACTCAAA ATACAGGGGA GAACAGTCCT AAGCTGTCGA ATGTGAACTA TCGCATTGTC
GGTGAGCTCA GCGACGTTCC CACGACGGAT CTCTTGCAAA ATCTCCGTCA GCTCGATGCT
CAAGGTCTTG CTGCTCGCCT GCAGGGATTA GTGAACCAAG GGGTACTGAA GCCATGA
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| Protein sequence | MYSLDINFLK ERTTTAPPVT TFGTAAVATN PSERLPLWIG VGIGLLLPGL ALVVTALANN
RVSTLTADKA ELEQQIQLGQ PAEARLKSIQ AEIEQINTDT TSLIQVFPQV KSQSAILTDL
SRRTPVAVQI SKIEQAGKKV TLQGSSSNYD SVNDLLLTLQ QSRFFTASSL RIEEAKLGAT
PTQNTGENSP KLSNVNYRIV GELSDVPTTD LLQNLRQLDA QGLAARLQGL VNQGVLKP
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