Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2428 |
Symbol | |
ID | 3774712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2499798 |
End bp | 2500244 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800876 |
Product | biopolymer transport ExbD like protein |
Protein accession | YP_401445 |
Protein GI | 81301237 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.303812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTC CTGCCGAAAA TGCCGAGTCA GAAGCTCGGA TTGAGATGTT GCCACTGATC GACGTGGTCT TCTGCATCCT GATCTTCTTC ATCTTGGCGA CCCTACAACT GACCCGACAA TCTGCTCTCG ACATCACCCT GCCCCAGTCC AGCACCAGTC GACTGCAGGA ACGACAGACC CTCCTGATCA GCTTGGATGC CGCTGGGCAA CCCTACGTCG ATTCCCAGCC TGTGACGCCG GAGCAACTGC GGCTGGTGCT TGTTGGCTTC AACCGCACCA ATCCCAATGG TTCGATGCTG CTTTACGCCG ATGGCAGTGC TGCCTATCGT GACATCGTGA CTGTCTTGGA TGCGATGCGG GCTGTCGGAG GCGATCGCGT TGCCCTTGCA ACGGAACCGG CCGATTTGCA GCGATCGCCC CAACTGGTTC CTACTCCTCT CCCGTAG
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Protein sequence | MKIPAENAES EARIEMLPLI DVVFCILIFF ILATLQLTRQ SALDITLPQS STSRLQERQT LLISLDAAGQ PYVDSQPVTP EQLRLVLVGF NRTNPNGSML LYADGSAAYR DIVTVLDAMR AVGGDRVALA TEPADLQRSP QLVPTPLP
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