Gene Synpcc7942_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2428 
Symbol 
ID3774712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2499798 
End bp2500244 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content57% 
IMG OID637800876 
Productbiopolymer transport ExbD like protein 
Protein accessionYP_401445 
Protein GI81301237 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.303812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC CTGCCGAAAA TGCCGAGTCA GAAGCTCGGA TTGAGATGTT GCCACTGATC 
GACGTGGTCT TCTGCATCCT GATCTTCTTC ATCTTGGCGA CCCTACAACT GACCCGACAA
TCTGCTCTCG ACATCACCCT GCCCCAGTCC AGCACCAGTC GACTGCAGGA ACGACAGACC
CTCCTGATCA GCTTGGATGC CGCTGGGCAA CCCTACGTCG ATTCCCAGCC TGTGACGCCG
GAGCAACTGC GGCTGGTGCT TGTTGGCTTC AACCGCACCA ATCCCAATGG TTCGATGCTG
CTTTACGCCG ATGGCAGTGC TGCCTATCGT GACATCGTGA CTGTCTTGGA TGCGATGCGG
GCTGTCGGAG GCGATCGCGT TGCCCTTGCA ACGGAACCGG CCGATTTGCA GCGATCGCCC
CAACTGGTTC CTACTCCTCT CCCGTAG
 
Protein sequence
MKIPAENAES EARIEMLPLI DVVFCILIFF ILATLQLTRQ SALDITLPQS STSRLQERQT 
LLISLDAAGQ PYVDSQPVTP EQLRLVLVGF NRTNPNGSML LYADGSAAYR DIVTVLDAMR
AVGGDRVALA TEPADLQRSP QLVPTPLP