Gene Synpcc7942_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2424 
Symbol 
ID3774708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2496824 
End bp2497627 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content55% 
IMG OID637800872 
Producthypothetical protein 
Protein accessionYP_401441 
Protein GI81301233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.129436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCC CTCAGCCGAT TGGCCGCGAT CGCCCTTTTG AAATTGGTCT CTACTTAGAA 
CGCGGCTGGC AACTGTTTCG CCAAAACTGG CAGCTCTACG TTCCCTTTGG CCTAATTCTG
TTTGCCTTTG GCTTCATCTT GGGCATGGCC TCAAGCCTGC TTCAGATTGC CGTGTGTCTG
TCGCTAGCGG TCTCGATTGA CGAGTGCCCA GAGTGGGTGC CTCAACTGGT TGATCTGCCC
TTCAATCTGA TCTCTTGGCT GGTGGGAACG CCCTTAGGGG CAGGACCTGT AGTTGCTGCC
CTCCTGCAGC TTCAGCACCA AACCCCAGAG TTCAGTGATT TCTTCAAGGG CTTTCGGCGC
TTTTGGCCCT TGGTCCTGAC CAGCTTTTTG ATCGGCTTCA TTATCTTTAT CGTCGTCTTC
GTGATCGCGC TCGTGTTCGG TGCAGTCGCC TTTTTGCTCA ATCAAGCTGG AACGCCAGTG
GAAGGATTGG TGGGCATTGC GATCGTGGGT GTTTTGCTGG CGATCGCAGC TGCAACCTAC
ATCGGTGTGG GCTATTTGTT CGTGACCCCG ATCGTCCTCG ATCGCCGGAT TGGGGTTTGG
CAAGCACTGG AACTGAGTCG ACAGGTGGTT GCCCCTCGCT GGTGGTCAGC TTTCGGCTTC
CTGATTTTGC TCGGTCTAAT CAATGGCTTA GGCTTTCTTG CCTGCTGTGT TGGTTTGCTG
GTCACCATTC CTGTGACGCT CTGTGCGATC GCGGTCGCCT ATTCTGATCA GATTGGCCTC
GAAACGGCTG AGACTGCGGT CTAG
 
Protein sequence
MVSPQPIGRD RPFEIGLYLE RGWQLFRQNW QLYVPFGLIL FAFGFILGMA SSLLQIAVCL 
SLAVSIDECP EWVPQLVDLP FNLISWLVGT PLGAGPVVAA LLQLQHQTPE FSDFFKGFRR
FWPLVLTSFL IGFIIFIVVF VIALVFGAVA FLLNQAGTPV EGLVGIAIVG VLLAIAAATY
IGVGYLFVTP IVLDRRIGVW QALELSRQVV APRWWSAFGF LILLGLINGL GFLACCVGLL
VTIPVTLCAI AVAYSDQIGL ETAETAV