Gene Synpcc7942_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2422 
Symbol 
ID3774706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2493978 
End bp2494844 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID637800870 
Producthypothetical protein 
Protein accessionYP_401439 
Protein GI81301231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.753628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0140022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG GGCAGCCAAC AGAACCAACA GAGGCCAAAA CGGTCACTGC CGTACCGGTG 
CTGCCGACTG ATCTCGAGGC GACGGTTGAC CAGACGATCG ATGCAGTTTT TGATCGGCTG
GGTCTCAACA GTGAACAGCG CAGTCTTTGG CTGGCATCTC GGGCTACCAG TCCAACCTTG
GTCGTCTACG CGCCCCCGCC GGCGCCCCCT GCACCTGTCA TCGCCACAGT GGAAACGGAT
CCCAATCGCG ATCGCTGGCG GCTGGTTTTT GCGGCGATCG CTCTCGTGCT GGCAGCTGGC
TTGGGATTTT GGAATCTGCG GCAATGGCAA CAACAGACGG CCCTCGCCAG CTCAGCTGAA
AACCAGGAAT TTGCCAGCTA CCTCAGTCGC AGTTTGGATT TACTGGAAGC GGATCCGACT
GCTGAAACTG CGATCGCTTC CAATCCCACT GCCGTGATGC CGCCCTTGGC TGGGTTAATT
CCGCCGCCCC CACCTAACGG CAACACTGGC ACCCTGCCGC CTCCGGCCCC GATCACGGTT
GCGCCAACTT CAGTTGGGAC GCTCCCGCCG CCTCCCCCAC TGTTGCCTGC TCCACCCGTC
AGTAGTGGGG GGAGCACGGT CAGTCAGCCG CCTGCCCCGC CGGTCACTGC GGCCCCAACT
CCGGTGGCCG CCAGCCGTAC CCTCAATGGC GTGATTGATC TAGGCGATCG CTCGACTGCC
CTGTTCACAA TCAATGGTGC TAGTCAACAG GTCGGCGTTG GTCAAAGCCT TGGGGATGGT
TACGTCGTCA AGCAAATCAC CAGCCAGAGC GTGACGCTGG GACGCGGTGG TAGTCAGCAG
ACCATCCCGA TCGGCGGGTC GTTCTAG
 
Protein sequence
MTAGQPTEPT EAKTVTAVPV LPTDLEATVD QTIDAVFDRL GLNSEQRSLW LASRATSPTL 
VVYAPPPAPP APVIATVETD PNRDRWRLVF AAIALVLAAG LGFWNLRQWQ QQTALASSAE
NQEFASYLSR SLDLLEADPT AETAIASNPT AVMPPLAGLI PPPPPNGNTG TLPPPAPITV
APTSVGTLPP PPPLLPAPPV SSGGSTVSQP PAPPVTAAPT PVAASRTLNG VIDLGDRSTA
LFTINGASQQ VGVGQSLGDG YVVKQITSQS VTLGRGGSQQ TIPIGGSF