Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2422 |
Symbol | |
ID | 3774706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2493978 |
End bp | 2494844 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637800870 |
Product | hypothetical protein |
Protein accession | YP_401439 |
Protein GI | 81301231 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.753628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0140022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCTG GGCAGCCAAC AGAACCAACA GAGGCCAAAA CGGTCACTGC CGTACCGGTG CTGCCGACTG ATCTCGAGGC GACGGTTGAC CAGACGATCG ATGCAGTTTT TGATCGGCTG GGTCTCAACA GTGAACAGCG CAGTCTTTGG CTGGCATCTC GGGCTACCAG TCCAACCTTG GTCGTCTACG CGCCCCCGCC GGCGCCCCCT GCACCTGTCA TCGCCACAGT GGAAACGGAT CCCAATCGCG ATCGCTGGCG GCTGGTTTTT GCGGCGATCG CTCTCGTGCT GGCAGCTGGC TTGGGATTTT GGAATCTGCG GCAATGGCAA CAACAGACGG CCCTCGCCAG CTCAGCTGAA AACCAGGAAT TTGCCAGCTA CCTCAGTCGC AGTTTGGATT TACTGGAAGC GGATCCGACT GCTGAAACTG CGATCGCTTC CAATCCCACT GCCGTGATGC CGCCCTTGGC TGGGTTAATT CCGCCGCCCC CACCTAACGG CAACACTGGC ACCCTGCCGC CTCCGGCCCC GATCACGGTT GCGCCAACTT CAGTTGGGAC GCTCCCGCCG CCTCCCCCAC TGTTGCCTGC TCCACCCGTC AGTAGTGGGG GGAGCACGGT CAGTCAGCCG CCTGCCCCGC CGGTCACTGC GGCCCCAACT CCGGTGGCCG CCAGCCGTAC CCTCAATGGC GTGATTGATC TAGGCGATCG CTCGACTGCC CTGTTCACAA TCAATGGTGC TAGTCAACAG GTCGGCGTTG GTCAAAGCCT TGGGGATGGT TACGTCGTCA AGCAAATCAC CAGCCAGAGC GTGACGCTGG GACGCGGTGG TAGTCAGCAG ACCATCCCGA TCGGCGGGTC GTTCTAG
|
Protein sequence | MTAGQPTEPT EAKTVTAVPV LPTDLEATVD QTIDAVFDRL GLNSEQRSLW LASRATSPTL VVYAPPPAPP APVIATVETD PNRDRWRLVF AAIALVLAAG LGFWNLRQWQ QQTALASSAE NQEFASYLSR SLDLLEADPT AETAIASNPT AVMPPLAGLI PPPPPNGNTG TLPPPAPITV APTSVGTLPP PPPLLPAPPV SSGGSTVSQP PAPPVTAAPT PVAASRTLNG VIDLGDRSTA LFTINGASQQ VGVGQSLGDG YVVKQITSQS VTLGRGGSQQ TIPIGGSF
|
| |