| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2421 |
|---|
| Symbol | |
|---|
| ID | 3774705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2492980 |
|---|
| End bp | 2493897 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800869 |
|---|
| Product | high-affinity iron transporter |
|---|
| Protein accession | YP_401438 |
|---|
| Protein GI | 81301230 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.328401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0402063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGA CGACTGCGCT GCCAAGCTTC TTGATTACCC TGCGCGAGGG ATTTGAAGCC
GCACTCGTGG TGGGCATTGT CCTCGCTTGC TTGGCCAAAG CCGATCGCCC TGACCTAAAG
CGCTGGGTTT ACCTCGGACT TTTGGCCGGA CTCCTGGCCA GTCTGTTACT GGGGCTGCTC
CTTGGTAATG CCCTCGGAAC GCTGAGCGCC GCGCAGTTTT ACTATGCTCC TGCCCTACGC
CTACTCCTAG AAGCCCTGCT CTGTGCGATC GCTGTCGGGT TACTCAGCTG GATGCTGATC
TGGATGACCC AGCAATCGCG ATCGCTGAAA TCGGAGGTGG AGCAAGGAAT TCAGCAAGCA
ATTCGAGCAG GGAGCGATCG CGCCGTCTTT GGCATTGTTT TTGCGGCGGT CTTGCGCGAA
GGCTTTGAAA CCGTGATCTT CCTGCTAACC CAAGGGCAAC GTGGTTGGTT GCCGAGTCTA
GGGGCAATCG CGGGTCTAAG TGGCGCTGGC CTGTTGGGTT GGGCAATCTT TCGAGGCAGC
ATCCGGCTCA ATCTGCGGCG TTTTTTCCAA GTTATGGGCG TCCTCCTGCT GGTGATTACG
GGTGGACTGC TACTGACCGC GCTACGGAAG CTCGACGGCG GACTCGGCCT GCTCAATCAA
CTCAGCCAAG GCCGTTGGGG ACTCTGCCAG AGTGCAGCAT CTTGTGTGCT AGGGCCACAA
CTCTGGGATC TGCAAGCCGT CCTACCCGAT CGCCAATTCC CAGGACTGTT CCTCAAATTA
ATTGCAGGCT ACAGCGATCG CCTCTTCCTC ATTCCTGCTA TTGCCTACAT CATCTTCTGG
ATTGGAGTGG GTGGCCTTTA CTTCCGCAGC CTGCGATCGC CCCAACCCAC CAAAACACCT
GCTCCGCAGG AGTCCTGA
|
|---|
| Protein sequence | MNWTTALPSF LITLREGFEA ALVVGIVLAC LAKADRPDLK RWVYLGLLAG LLASLLLGLL
LGNALGTLSA AQFYYAPALR LLLEALLCAI AVGLLSWMLI WMTQQSRSLK SEVEQGIQQA
IRAGSDRAVF GIVFAAVLRE GFETVIFLLT QGQRGWLPSL GAIAGLSGAG LLGWAIFRGS
IRLNLRRFFQ VMGVLLLVIT GGLLLTALRK LDGGLGLLNQ LSQGRWGLCQ SAASCVLGPQ
LWDLQAVLPD RQFPGLFLKL IAGYSDRLFL IPAIAYIIFW IGVGGLYFRS LRSPQPTKTP
APQES
|
|---|
| |