| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2414 |
|---|
| Symbol | |
|---|
| ID | 3774698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2485595 |
|---|
| End bp | 2486650 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_401431 |
|---|
| Protein GI | 81301223 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.177274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0190439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC CCATCACTAA GTTTGCCTAC CAGACCTTTC AGCAGAGCAA AAGCCTGCTG
GGGCTGACTC ACAAGAACCT CAGCACGCAA CTGATGCGGT TGCTCGCACC CACGAATGGT
GAGCGAGAAG GTATCTCGCC AGCTCTGATG AGCCAACTGC AGGCGTCGAT GCAAGTGTTG
CTCGACGAAG ACTATGCAGA TGCTGAGGCC GGCGTCTATC CGCTGTCGCA GCTGTTCGAT
ACGCCGTGGC AGGACATCGT GCAGCAATAT CCCCGCCTCT GGCTGGATAT GCCATCAACT
TGGCAGCGCG CCCGCGAGAA GCGCTATCAA GACTTTGATG AAACCGTCGA AACCGATCGC
TATCCCAGCT ACTACGTCCA AAACTTTCAT CACCAGACGG GCGGCTACCT GACCGAGGAA
TCGGCAGAGC TCTACGATCT GCAGGTCGAG ATTCTCTTTA ACGGCACCGC CGATCCGATG
CGGCGGCGAA TTCTGCGCCC CCTCAAGCAG GGACTGCAAG CCTTGGCTCG CCCTGAAAAA
GATCTACGTG TGCTGGATGT GGCTTGCGGC ACGGGTCGGA CCCTGCGCCA TTTGCGATCG
GCACTGCCCA GCGCCAACCT CTACGGCACC GACCTATCGC CCGCCTATCT CCGTAAAGCC
AACCAACTCC TCTCAGAACG GCCGGGAGAA CTACCGCAAC TGCTGCAGGC TAACGCGGAA
GAACTGCCCT ATCAAGATGG CTTCTTCCAA GGCGTGACTT CTGTTTTCCT CTTCCATGAA
TTGCCGCCGC AAGCTCGGCA AAACGTGATC AATGAATGCT TCCGCGTGCT TGAAGCGGGC
GGCACCGTTG TCCTCAATGA TTCGATTCAG GCGATCGACT CACCGGAATT CCGCCCTCTG
ATGGATGGCT TCTATCAGAT GTTCCACGAG CCCTACTACC GTCATTACAT GGAAGATGAT
CTCTGCGATC GCCTTGGCCA AGCGGGGTTT GTCGATATCC AAACCAGCAA CCACTTTATG
AGCAAAATCT GGGTGGCCCG CAAGCCGATC GCCTAA
|
|---|
| Protein sequence | MADPITKFAY QTFQQSKSLL GLTHKNLSTQ LMRLLAPTNG EREGISPALM SQLQASMQVL
LDEDYADAEA GVYPLSQLFD TPWQDIVQQY PRLWLDMPST WQRAREKRYQ DFDETVETDR
YPSYYVQNFH HQTGGYLTEE SAELYDLQVE ILFNGTADPM RRRILRPLKQ GLQALARPEK
DLRVLDVACG TGRTLRHLRS ALPSANLYGT DLSPAYLRKA NQLLSERPGE LPQLLQANAE
ELPYQDGFFQ GVTSVFLFHE LPPQARQNVI NECFRVLEAG GTVVLNDSIQ AIDSPEFRPL
MDGFYQMFHE PYYRHYMEDD LCDRLGQAGF VDIQTSNHFM SKIWVARKPI A
|
|---|
| |