| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2406 |
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| Symbol | |
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| ID | 3774690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2479051 |
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| End bp | 2480190 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800854 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_401423 |
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| Protein GI | 81301215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000101651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0131925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCG AGGTAGCCGT CTTTGGGGGC GGCGTCATTG GCTTGGCGAT CGCGCTAGAA
CTGCGATCGC GAGGCGCGAT GGTGCAGGTC TACAGTCAAA ACACTCAGGC GGCGGCAGGT
CGTGTGGCAG CAGGGATGTT GGCGCCCCAG TCGGAAGGCA TCGAAGTCGG GCCCATGCTG
GATCTGGGGC TGCGCAGCCG ATCGCTCTAC GCCCGCTGGA CCCAGCAACT CGAACAACTC
AGCGGTCAAG ACAGTGGCTA CTGGCCCTGC GGCATTTTGG TGCCCCTGAG TGAGGCCAAA
AATCGCGATC GCTATCCTCA TCCAGCAGAA TCTCCGGGGC AATGGCTCTC GGCAGCGGAC
TTACGAGACT TTCAGCCCGC ACTATGCTCT GACCTAATCG GTGGCTGGTG GTTTTCCCAA
GAAGGGCAAG TTGATAGTCG CCGTGCCCTG TATCCAGCGC TGCGAGCCGC CGCGATCGCC
AGTGGCGTCA CGATCCATGA AAGCGTGGCG CTGCGGGAGT TATCTGTAAC AGGCGATCGC
CTGCAATCCG CGATGACCGA TCGCGGGCCA GTTCAAGCTG ACGCCTACGT TCTGGCAACC
GGCGCTTGGT CCGGCGACTG GCTACAACTG CCGGTCTATC CCGTTAAAGG CCAAATGTTC
TCGCTGCAAG CTGACCCGCG TTTGCTGAAC CACGTTTTGT TTGGTGAGCG GGTGTATATT
GTGCCGCGCC GAGATGGTCT GATTGTGGTC GGTGCCACCA TGGAAGCGAC GGCGGGATTC
AGGACTGGCA ACACCGCTGG CCCCTTACAG AGCTTGATGG CCGAGGCGAT CGCCCTCGTT
CCGGCTCTGG CGGACTGTCC ACTGGTTGAA ACTTGGTGGG GATACCGTCC CGCGACACCA
GATGAATGGC CGATCCTGGG GCAAGGCCCC GCTGAGAACT TATTCTTGGC GACCGGCCAC
TACCGCAACG GTATGCTGCT CGCCCCAATT ACCGCTCAGC TACTCGCTGA CCAAATTCTC
GACCACTGCA CGGATCAACT GCTTCATGCC TTCCGTTACG ACCGCTTCTC CAGCCATGAC
TCCAGCACCC ATCAACCCTT ACCCGCTCTT GCAGGCTTGT CAGCGTCAAC GGGTCAGTGA
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| Protein sequence | MAFEVAVFGG GVIGLAIALE LRSRGAMVQV YSQNTQAAAG RVAAGMLAPQ SEGIEVGPML
DLGLRSRSLY ARWTQQLEQL SGQDSGYWPC GILVPLSEAK NRDRYPHPAE SPGQWLSAAD
LRDFQPALCS DLIGGWWFSQ EGQVDSRRAL YPALRAAAIA SGVTIHESVA LRELSVTGDR
LQSAMTDRGP VQADAYVLAT GAWSGDWLQL PVYPVKGQMF SLQADPRLLN HVLFGERVYI
VPRRDGLIVV GATMEATAGF RTGNTAGPLQ SLMAEAIALV PALADCPLVE TWWGYRPATP
DEWPILGQGP AENLFLATGH YRNGMLLAPI TAQLLADQIL DHCTDQLLHA FRYDRFSSHD
SSTHQPLPAL AGLSASTGQ
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