Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2405 |
Symbol | |
ID | 3774689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2478739 |
End bp | 2478993 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637800853 |
Product | hypothetical protein |
Protein accession | YP_401422 |
Protein GI | 81301214 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000012248 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00954272 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGATTG CCGTTTTGCG TTTGCGACCG GGTCAGGATC TCAAACAAGC CCTGTGGGAT TGGACACAGG AACACCAACC CAGTGCGGCT TGCTTGCTTA GTGCGGTCGG CAGTCTGGAT GCGGTTTGCC TGCGACTGGC CGGCGGCGAT CGCCAACTCC AGCGACAAGA GCCTCACGAA ATTCTGAGTC TGAGCGGCAC CCTCTGTCTG GATGGACTGC ACCTTCATCT CGCGATCGCG GATGCCACGG GCTAG
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Protein sequence | MEIAVLRLRP GQDLKQALWD WTQEHQPSAA CLLSAVGSLD AVCLRLAGGD RQLQRQEPHE ILSLSGTLCL DGLHLHLAIA DATG
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