Gene Synpcc7942_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2380 
Symbol 
ID3774663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2447344 
End bp2447772 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content54% 
IMG OID637800828 
Producthypothetical protein 
Protein accessionYP_401397 
Protein GI81301189 
COG category[S] Function unknown 
COG ID[COG3937] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.153903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG TTACTGATCT TCTCCAAAAA GCGGTCTACC TTGGCATCGG GCTGGCTTCC 
TATGTGCCCG AGTTGGCGAA AAGCGAAAAT CTCTCGGATC TGAGCGATCG CGTCCAAAAA
TTAGTCGATG ACTTGGTCGC TCGGGGTGAA ATGACCACGG AAGAAGCCAA GCATGCGGTT
GAAGACTTGG TGAGACAAGC GCAAGGCTCT GTCAATGGTC CCGCTGGATC GCCCCCGCCT
ATCCCTCAGC CCATTCAGAT CACGGTTGAG GAAGTCGAAC CCGAGGCCAG TTCGAGCGCG
GCCTCAACGC CTGCCGACAG TGCGCCATCT AACAATCCAG CTTCTGCTGC TGACGATCTG
GAAAGTCTGC GTCAGCAAGT CAGTCAACTG CGAGAAGAAT TGAACCGCCT CAATCAGAAC
AAAGGATAA
 
Protein sequence
MSTVTDLLQK AVYLGIGLAS YVPELAKSEN LSDLSDRVQK LVDDLVARGE MTTEEAKHAV 
EDLVRQAQGS VNGPAGSPPP IPQPIQITVE EVEPEASSSA ASTPADSAPS NNPASAADDL
ESLRQQVSQL REELNRLNQN KG