| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2374 |
|---|
| Symbol | |
|---|
| ID | 3774657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2441447 |
|---|
| End bp | 2442805 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637800822 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_401391 |
|---|
| Protein GI | 81301183 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.997714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGC CTCGGCGCTA CCACATCACC ACCTTCGGCT GCCAAATGAA CAAAGCCGAC
TCGGAGCGGA TGGCTGGCAT CCTCGAGGAT TTGGGCTACA TCTGGAGCGA GGAGGCCAAC
GACGCGGACC TGGTGCTCTA CAACACCTGC ACGATTCGCG ACAACGCCGA GCAAAAGGTC
TACTCCTACC TCGGTCGCCA GGCCGAACGC AAACGCCAGC AGCCGGATCT AACGCTGATT
GTGGCGGGCT GTGTGGCGCA GCAAGAGGGC GAGTCGCTAC TGCGGCGGGT GCCAGAACTG
GACTTGGTGA TGGGGCCGCA ACATGCCAAT CGCCTCGCCG ATTTGCTAGC TCAGGTGGAA
GCGGGCAGTC AAGTCGTCGC CACGGAAGAA GTGGAAATTG CTGAAGATAT TACCCAGCCG
CGCCGCGATA GCACCATCAC CGCTTGGGTG AACGTCATCT ACGGCTGCAA CGAACGCTGC
ACCTACTGCG TGGTGCCCAA CGTTCGCGGT CGCGAGCAAT CGCGGGAACC GGCGGCGATC
CGCGCTGAAA TTGAGCAGCT AGCCGCGCAG GGCTACCGCG AAATTACGCT GCTCGGTCAA
AACATTGATG CCTACGGCCG TGATCTGCCG GGCAGTACTC CCGAAGGTCG CCACCTGCAC
ACCCTGACGG ACTTGCTCTA CACCATCCAC GATGTGCCGG GGATCGAGCG GATTCGCTTT
GCTACTAGCC ACCCGCGCTA TTTCACGGAG CGACTGATTC GCGCCTGTGC CGAGTTACCG
AAAGTCTGCG AATACTTCCA CATTCCCTTC CAGTCAGGCG ACAACGACGT GCTGAAGGCG
ATGGCACGGG GCTATACCGT TGAGCGCTAC CTGCGGATCG TGGAGCAGAT CCGCGACATC
ATCCCCGATG CGGCGATCAG TGCGGATGCG ATCGTGGCCT TCCCAGGTGA AACAGAAGAA
CAATTTGAGA ACACGCTGAA ACTGGTTGAG CAGGTTGGTT TTGATCTGGT CAACACGGCG
GCTTATTCGC CCCGTCCTGG CACGCCAGCA GCCAATGCGC CCAATCAACT GTCGGAAGAG
GTCAAACAGG ATCGCCTGCA ACGCCTCAAT CACTTAGTGG CGCAAATGGC TGCCGATCGC
TCGCAGCGCT ATTTGGGTCG CACCGAAGAA GTGCTGATCG AGGCGACCAA TCCCCGCAAT
CCTCAGCAGG TGATGGGTCG GACGCGCACC AATCGCCTTG TCTTCTGCGA TGGCACGATC
GCGCAACTCG AAGGGCAACT GGTGCCGGTA CGGATCACGG AAACCCGCGC CTTTAGCCTG
ACTGGACAGA TTCTCAGCCC CGTGGCGGCT GGGTGCTAA
|
|---|
| Protein sequence | MSTPRRYHIT TFGCQMNKAD SERMAGILED LGYIWSEEAN DADLVLYNTC TIRDNAEQKV
YSYLGRQAER KRQQPDLTLI VAGCVAQQEG ESLLRRVPEL DLVMGPQHAN RLADLLAQVE
AGSQVVATEE VEIAEDITQP RRDSTITAWV NVIYGCNERC TYCVVPNVRG REQSREPAAI
RAEIEQLAAQ GYREITLLGQ NIDAYGRDLP GSTPEGRHLH TLTDLLYTIH DVPGIERIRF
ATSHPRYFTE RLIRACAELP KVCEYFHIPF QSGDNDVLKA MARGYTVERY LRIVEQIRDI
IPDAAISADA IVAFPGETEE QFENTLKLVE QVGFDLVNTA AYSPRPGTPA ANAPNQLSEE
VKQDRLQRLN HLVAQMAADR SQRYLGRTEE VLIEATNPRN PQQVMGRTRT NRLVFCDGTI
AQLEGQLVPV RITETRAFSL TGQILSPVAA GC
|
|---|
| |