| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2368 |
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| Symbol | |
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| ID | 3774651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2433890 |
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| End bp | 2435020 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637800816 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_401385 |
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| Protein GI | 81301177 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.108323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTAC CCAGAACCCA TCGTCTCCAG CGTTTGACGG GCTGGGGGGT CGCCAGCGTC
GTGCTGATGG GCGTTGCCAG CTGCCAAGGT CGGCAACCCG CAGCCTTTCA AGGGCCACCA
GCGCTACCGG TCGACGTCAC CAAGGCCACC GTCGAGACAG TCAATGACCT GACCGAGTAC
TTGGGGGCTC TAGAAGCGAC GGAGCAAACT ATCCTGCGTC CTCAAATTCA GGGCCGAATT
GTCAGTGTGG CTGTGCAGCC TGGACAAATT GTGTCGGTCG GTCAGCCGAT GTTTGTGCTG
GACTCGGAGC AAGTTGAAGC AGATGTGGCA GCTGCCAATG CAGAGGTCGC TCGTCAAGAA
GCCCAACTTC GAGATGCCAA GATTACTTTT GAGCGGCAAA AGTTTCTGGC GGATCAAGGG
GTCGTTCCCC TACAGAACCT AGATAACGCT CGACGAGAGC TCCAGACAGC TCAAGCGCAG
CTTAAAGCAG CGCAACAGAA TGCAGTCGCC AAATCGGTTA ATGTCCAGTA CAAAACTGTG
CGGGCCCCGA TCAATGGGTT GGTCGGCGAT ATCCGGCTCA AAATCGGTGA CTTTGTCGAC
ACTGGGGCAG AGCTGACAAC GATCACCCGC AACAATCAGC TGTTCATTAA TATTCCAGTT
CCAACGGTTC GCATTCCACA GCTTCGCAAG GGTCAACCAG TCAAGCTTTT AGACCCATTT
TCCAAGAATA TTCTGGCAAC TGGAGCTGTC GACTTTGTCT CCCCGGTTGT GCAGCAAAAC
TTACAAACGG TCTTAGTGAA AGTTGTTGTT CCCAATGCTG ATGGCTTAAT CCGTAACGGT
CAAATCGTTC AATCCGAGAT TGTTTGGGAC CGCAAGGAGG CTGTTTTGGT GCCGACTCAA
GCAGTCACTC CCTTAGCCGG TGCCAACTTT GTCTATGTTG TAGAGCCTAA GCCCAACAGC
CCTGATCAAT TTCAGGTTCG ACAACAAAAG GTTGAGCTGG GTTCCATTTT CAATAATCGC
TATCAAATTC GCTCAGGACT AAAGCCGGGC GAAACTGTCG CTACGACCAA CCTGCTCAGC
CTGACAGATA AGGCAACTGT TAAACCTCAA ACGCCCAACG CTTCTCGCTA A
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| Protein sequence | MAVPRTHRLQ RLTGWGVASV VLMGVASCQG RQPAAFQGPP ALPVDVTKAT VETVNDLTEY
LGALEATEQT ILRPQIQGRI VSVAVQPGQI VSVGQPMFVL DSEQVEADVA AANAEVARQE
AQLRDAKITF ERQKFLADQG VVPLQNLDNA RRELQTAQAQ LKAAQQNAVA KSVNVQYKTV
RAPINGLVGD IRLKIGDFVD TGAELTTITR NNQLFINIPV PTVRIPQLRK GQPVKLLDPF
SKNILATGAV DFVSPVVQQN LQTVLVKVVV PNADGLIRNG QIVQSEIVWD RKEAVLVPTQ
AVTPLAGANF VYVVEPKPNS PDQFQVRQQK VELGSIFNNR YQIRSGLKPG ETVATTNLLS
LTDKATVKPQ TPNASR
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