Gene Synpcc7942_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2367 
Symbol 
ID3774650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2432951 
End bp2433454 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content56% 
IMG OID637800815 
Producthypothetical protein 
Protein accessionYP_401384 
Protein GI81301176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00815435 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCA AGCTCCTAGA ACCGCCATCG GCCCCAGTCG TTTCATCCCA GTGTTCCTGC 
TGGCGATGTG CTTGGTGGTT GGCTGGGAGC TCCGTAGCTC TGGGTGCGAT CGCCTTGGCC
TTGACCAATC CCTCGTCTAG TCAGTACGGG CAATTTGCGG CGGCAACGAG TCAGAAGCTT
GTTCAGCAAG AGATTTGTGC CCGCTTAGAG CCCCTCAATC TGCAACGTCT ACAGCAACTT
TGCAATCGCA TGGGGCAGCA AGCTGGGTCC CAAATGGAAG AGTGGGTGTT GCAATCCAGC
GATCGCCAGA ACTTTGGCTT GCTGAGCCTC TATGAGACTC GCCTGTCAGT GCGATCGCTG
CTCCAGACTT CTGACGTGCC CGACTGGAGC TTAGAGCTGA AGAGTGTGGG TGCTCTCTCT
GGCTTTAGCC TATTGCAAGT TAATTGGAAA ACTGATCCTG AAGTGAGGGC TGATCCCGCC
TCGGAGGGCA AGCTAAGACA GTAG
 
Protein sequence
MRGKLLEPPS APVVSSQCSC WRCAWWLAGS SVALGAIALA LTNPSSSQYG QFAAATSQKL 
VQQEICARLE PLNLQRLQQL CNRMGQQAGS QMEEWVLQSS DRQNFGLLSL YETRLSVRSL
LQTSDVPDWS LELKSVGALS GFSLLQVNWK TDPEVRADPA SEGKLRQ