Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2361 |
Symbol | |
ID | 3774644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2427870 |
End bp | 2428739 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800809 |
Product | glutamate racemase |
Protein accession | YP_401378 |
Protein GI | 81301170 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.566119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGG GGGCTATTTT TTTGCATTCT TCAACTGCTG CCCCGATCGG TGTGTTTGAC AGCGGTGTTG GGGGACTCAC CGTCCTGCGC GAGCTGCAGC GTCAGCTCCC CCACGAAAGT TTTCTCTACT TTGGCGACAC GGCACGGCTG CCCTACGGCA CGCGATCGCC GGCGGAGATT CGCCAGTTCG TGCGCGAGAT CTTGGACTGG ATGCAGGCCG AGGGTTGCAA GTTAGTCGTT ATGGCCTGCA ACACCAGCTC GGCCCTAGCC CTCGAAGCGC TGCGTGGAGA CTACACCATG CCGCTCATTG GCCTCATTCA GCCTGCTGCG CGGGTTGCCG TCCAACGGGG CCAGCGGATT GGCGTGATTG CCACGGCTGC CACTGCCCAA AGTCGTGCCT ATCGCCAGGC TCTACGCGAG GCCAACCCCA ACGTTCAAGT CTGGGAAATT GGCTGCCCTG AGTTCGTCCC TTTGGTAGAG CAGCAACGGA TTCATGATCC CCAGACGCTG CAGGTGGCAG CTCAATACCT TGCTCCATTG ATCGAGGCGC AGGTGGATAC GTTGATCTAT GGTTGTACCC ACTACCCGCA TTTAGCGCCG GTGATTCAAC AGCTGCTGCC CAGCAGCACG CACCTACTGG ATCCGGCAGA AGCCGTGACC CGATCGGTGC AAATGGAGCT GGAAGTCTTA GGACTCAGTC ACACCTCTAA GGCCAGTACG GTGCGATTTT GTGTCAGCCA CGATCCTCAG CATTTCAGTC TGGCGATCGA GCGGTGGCTA GGGTTTCAAG CTCCTGTCGA CCTGATTCAA CTACCGACGC GATCGCTTCC TTCTGCCCAC TTTGCTTCGG AAGCGGAAGG CGTAGCTTAG
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Protein sequence | MPPGAIFLHS STAAPIGVFD SGVGGLTVLR ELQRQLPHES FLYFGDTARL PYGTRSPAEI RQFVREILDW MQAEGCKLVV MACNTSSALA LEALRGDYTM PLIGLIQPAA RVAVQRGQRI GVIATAATAQ SRAYRQALRE ANPNVQVWEI GCPEFVPLVE QQRIHDPQTL QVAAQYLAPL IEAQVDTLIY GCTHYPHLAP VIQQLLPSST HLLDPAEAVT RSVQMELEVL GLSHTSKAST VRFCVSHDPQ HFSLAIERWL GFQAPVDLIQ LPTRSLPSAH FASEAEGVA
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