Gene Synpcc7942_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2361 
Symbol 
ID3774644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2427870 
End bp2428739 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID637800809 
Productglutamate racemase 
Protein accessionYP_401378 
Protein GI81301170 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.566119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGG GGGCTATTTT TTTGCATTCT TCAACTGCTG CCCCGATCGG TGTGTTTGAC 
AGCGGTGTTG GGGGACTCAC CGTCCTGCGC GAGCTGCAGC GTCAGCTCCC CCACGAAAGT
TTTCTCTACT TTGGCGACAC GGCACGGCTG CCCTACGGCA CGCGATCGCC GGCGGAGATT
CGCCAGTTCG TGCGCGAGAT CTTGGACTGG ATGCAGGCCG AGGGTTGCAA GTTAGTCGTT
ATGGCCTGCA ACACCAGCTC GGCCCTAGCC CTCGAAGCGC TGCGTGGAGA CTACACCATG
CCGCTCATTG GCCTCATTCA GCCTGCTGCG CGGGTTGCCG TCCAACGGGG CCAGCGGATT
GGCGTGATTG CCACGGCTGC CACTGCCCAA AGTCGTGCCT ATCGCCAGGC TCTACGCGAG
GCCAACCCCA ACGTTCAAGT CTGGGAAATT GGCTGCCCTG AGTTCGTCCC TTTGGTAGAG
CAGCAACGGA TTCATGATCC CCAGACGCTG CAGGTGGCAG CTCAATACCT TGCTCCATTG
ATCGAGGCGC AGGTGGATAC GTTGATCTAT GGTTGTACCC ACTACCCGCA TTTAGCGCCG
GTGATTCAAC AGCTGCTGCC CAGCAGCACG CACCTACTGG ATCCGGCAGA AGCCGTGACC
CGATCGGTGC AAATGGAGCT GGAAGTCTTA GGACTCAGTC ACACCTCTAA GGCCAGTACG
GTGCGATTTT GTGTCAGCCA CGATCCTCAG CATTTCAGTC TGGCGATCGA GCGGTGGCTA
GGGTTTCAAG CTCCTGTCGA CCTGATTCAA CTACCGACGC GATCGCTTCC TTCTGCCCAC
TTTGCTTCGG AAGCGGAAGG CGTAGCTTAG
 
Protein sequence
MPPGAIFLHS STAAPIGVFD SGVGGLTVLR ELQRQLPHES FLYFGDTARL PYGTRSPAEI 
RQFVREILDW MQAEGCKLVV MACNTSSALA LEALRGDYTM PLIGLIQPAA RVAVQRGQRI
GVIATAATAQ SRAYRQALRE ANPNVQVWEI GCPEFVPLVE QQRIHDPQTL QVAAQYLAPL
IEAQVDTLIY GCTHYPHLAP VIQQLLPSST HLLDPAEAVT RSVQMELEVL GLSHTSKAST
VRFCVSHDPQ HFSLAIERWL GFQAPVDLIQ LPTRSLPSAH FASEAEGVA