Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2360 |
Symbol | |
ID | 3774643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2426823 |
End bp | 2427857 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637800808 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_401377 |
Protein GI | 81301169 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.26107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATCGC GAACTTGGGC TATTGGTCTA GGCAGCCTGT TACTCACGAC AGTTTTAGCG TTGCCGGCCC GAGCCAATCA ACTGCTGTTT TGGCGCTTGG ATGCGAGTCA GAATCGCCTA GAGTTCAAGA CTCAAGGGGC GATCGCTCCC CAAGCGCAAC TGATCTTTAA TCCCCAGCGG ATCGTGATCG ACCTGCCGGG CGCCACCTTA CCTGCCAATC GATCGCCGAT TCAGGGGGGT GCCGGTATCC GGGAAATTCG GGTGGGTCAG CCCGAAGCCG GCATTACTCG CCTCGTGATT GAAATTGCCC CAGGCTATAC AGTCGATCCC AGTCAGCTAC GGGTCGAAGG CCTCGATGCC ACCACTTGGC AGATTCGGCT GCAGCCAGCA CTCCGCTTTG CAGGTGGGGG CATTGTGCCA CCGCGATCGC CGGTGACGCC CCCGCCCTCT CGACAGCCCC AGCTACCCCC ACCGCGATCG CCTCAGGTGG GCCGCCAGAT TGTCGTAATT GACCCAGGTC ATGGCGGTCC CGATCCAGGT GCGATCGGGA TCAACGGCCT GCAAGAAGCG GAGCTGGTTC TCGACATTTC CCAGCAAGTC GCCGCGATTC TCCGCAACAG CGGTCTCGAT GTCCGCATGA CTCGCACCGC GGACATCGAC CTTGATCTCG AGCCACGGGT ACAAATTGCA GAGCAGGCCC GTGCCGATAT TTTTGTCAGC ATCCATGCCA ATGCCCTCAG TCTCGATCGC CCCGAAGTCA ATGGACTCGA GACCTACTAC TACGCTTCCC AAGCGGGAGA ACGACTGGCT CGCACTATCC ATCAGTCAAT TCTGTCCAGC GTATCGATTC GCGATCGCGG TGTGCGTCAG GCACGGTTTT ACGTGATTCG GCGTACCACC ATGCCTGCCG TTCTGGTGGA AACCGGCTTC GTGACGGGCA GTGAGGACAG CCGCAACCTA GCCAACCCCA ATCACCGGCG CAAAATGGCA GAAGCGATCG CCCGCGGTAT CCTACAGTAC GTCCGTCAAA ACTGA
|
Protein sequence | MRSRTWAIGL GSLLLTTVLA LPARANQLLF WRLDASQNRL EFKTQGAIAP QAQLIFNPQR IVIDLPGATL PANRSPIQGG AGIREIRVGQ PEAGITRLVI EIAPGYTVDP SQLRVEGLDA TTWQIRLQPA LRFAGGGIVP PRSPVTPPPS RQPQLPPPRS PQVGRQIVVI DPGHGGPDPG AIGINGLQEA ELVLDISQQV AAILRNSGLD VRMTRTADID LDLEPRVQIA EQARADIFVS IHANALSLDR PEVNGLETYY YASQAGERLA RTIHQSILSS VSIRDRGVRQ ARFYVIRRTT MPAVLVETGF VTGSEDSRNL ANPNHRRKMA EAIARGILQY VRQN
|
| |