Gene Synpcc7942_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2360 
Symbol 
ID3774643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2426823 
End bp2427857 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID637800808 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_401377 
Protein GI81301169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.26107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCGC GAACTTGGGC TATTGGTCTA GGCAGCCTGT TACTCACGAC AGTTTTAGCG 
TTGCCGGCCC GAGCCAATCA ACTGCTGTTT TGGCGCTTGG ATGCGAGTCA GAATCGCCTA
GAGTTCAAGA CTCAAGGGGC GATCGCTCCC CAAGCGCAAC TGATCTTTAA TCCCCAGCGG
ATCGTGATCG ACCTGCCGGG CGCCACCTTA CCTGCCAATC GATCGCCGAT TCAGGGGGGT
GCCGGTATCC GGGAAATTCG GGTGGGTCAG CCCGAAGCCG GCATTACTCG CCTCGTGATT
GAAATTGCCC CAGGCTATAC AGTCGATCCC AGTCAGCTAC GGGTCGAAGG CCTCGATGCC
ACCACTTGGC AGATTCGGCT GCAGCCAGCA CTCCGCTTTG CAGGTGGGGG CATTGTGCCA
CCGCGATCGC CGGTGACGCC CCCGCCCTCT CGACAGCCCC AGCTACCCCC ACCGCGATCG
CCTCAGGTGG GCCGCCAGAT TGTCGTAATT GACCCAGGTC ATGGCGGTCC CGATCCAGGT
GCGATCGGGA TCAACGGCCT GCAAGAAGCG GAGCTGGTTC TCGACATTTC CCAGCAAGTC
GCCGCGATTC TCCGCAACAG CGGTCTCGAT GTCCGCATGA CTCGCACCGC GGACATCGAC
CTTGATCTCG AGCCACGGGT ACAAATTGCA GAGCAGGCCC GTGCCGATAT TTTTGTCAGC
ATCCATGCCA ATGCCCTCAG TCTCGATCGC CCCGAAGTCA ATGGACTCGA GACCTACTAC
TACGCTTCCC AAGCGGGAGA ACGACTGGCT CGCACTATCC ATCAGTCAAT TCTGTCCAGC
GTATCGATTC GCGATCGCGG TGTGCGTCAG GCACGGTTTT ACGTGATTCG GCGTACCACC
ATGCCTGCCG TTCTGGTGGA AACCGGCTTC GTGACGGGCA GTGAGGACAG CCGCAACCTA
GCCAACCCCA ATCACCGGCG CAAAATGGCA GAAGCGATCG CCCGCGGTAT CCTACAGTAC
GTCCGTCAAA ACTGA
 
Protein sequence
MRSRTWAIGL GSLLLTTVLA LPARANQLLF WRLDASQNRL EFKTQGAIAP QAQLIFNPQR 
IVIDLPGATL PANRSPIQGG AGIREIRVGQ PEAGITRLVI EIAPGYTVDP SQLRVEGLDA
TTWQIRLQPA LRFAGGGIVP PRSPVTPPPS RQPQLPPPRS PQVGRQIVVI DPGHGGPDPG
AIGINGLQEA ELVLDISQQV AAILRNSGLD VRMTRTADID LDLEPRVQIA EQARADIFVS
IHANALSLDR PEVNGLETYY YASQAGERLA RTIHQSILSS VSIRDRGVRQ ARFYVIRRTT
MPAVLVETGF VTGSEDSRNL ANPNHRRKMA EAIARGILQY VRQN