| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2352 |
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| Symbol | |
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| ID | 3774635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2419575 |
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| End bp | 2420198 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637800800 |
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| Product | sigma 54 modulation protein / SSU ribosomal protein S30P |
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| Protein accession | YP_401369 |
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| Protein GI | 81301161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTAG TCGTCCAGGG AACCAACATC GATGTCACTG CTGCAATTCA TGATTATGTG
CAGCAAAAGC TGGACAAAGC TGTTAGCCAC TACCAGAGCT TCTTGACTGA GATTGATGTT
CATTTATCTG TTGCTAAACA TGCTAAATCG AATCCGCGTC AAACGGCTGA GGTCACCATT
TATGCGAATG GCACGGTCAT TCGAGCGGAA GAGTGCAATG AAAATCTTTA CGCCAGTATC
GATTTAGTTT CAGATAAAAT TACTCGCCAA CTGAAGAAAT ATAAGGAGAA ACTCCGCGAT
CGCAAAGGTC AGCTCTCAAC TGCAGAAACT GCTGATCAGC TCTCGGATGG TGCCCTCGTC
ACCGATTTGC TCAACGGCCG GCAGCCCGAA CTTCCTCAGG ACATTGTGCG AACGAAATAC
TTCGCTATGC CAGCCATGAC CGTCGAAGAT GCCTTGGCAC AGCTACAACT AGTTGATCAC
GACTTCTATA TGTTCCGCAA TGCGGCGACG GGAGAAATCA ACGTGATCTA TGAGCGTAAT
CACGGCGGTT ACGGTGTGAT TCAACCTCGA CCCGAAGGCA ACTCAGAGAA GGCGGTAGTC
GTGCGAAGTG AGGCAGTGCT CTAG
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| Protein sequence | MKLVVQGTNI DVTAAIHDYV QQKLDKAVSH YQSFLTEIDV HLSVAKHAKS NPRQTAEVTI
YANGTVIRAE ECNENLYASI DLVSDKITRQ LKKYKEKLRD RKGQLSTAET ADQLSDGALV
TDLLNGRQPE LPQDIVRTKY FAMPAMTVED ALAQLQLVDH DFYMFRNAAT GEINVIYERN
HGGYGVIQPR PEGNSEKAVV VRSEAVL
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