Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2349 |
Symbol | |
ID | 3774632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2416387 |
End bp | 2417580 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637800797 |
Product | twitching motility protein |
Protein accession | YP_401366 |
Protein GI | 81301158 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATA CCTCGCGCCT GCCACTCCCA CCGCCTCCCC CTCCCTTTGG TGCAGGTGGA CTGTCTGCGA TGCCCGTCAC CCAGGTCAGC GCTTCCCCGG CAACCCCAGC AGCCGTGCCC CAACGATCGG CCAATCAGCC AACCCTTGCC GAAATTGTGC GGCAGGCCTA CGAGCACGAT TACTCGGATG TCCACCTTGG CGTGGGGGAA GTGCCGCGTT TTCGCGATCG CGGTGAAATT GTGCAAACAA CCTATCCAGT CACCGACACA GCTACCTTTA ACGCCTGGCT GCGCGAGGTT TTGACCGAAG CGCAAGTGCG TGAATTTGAG CAGGGATTGG ACTTCGACGG CGCAACTCAG TACGACTTTG CGCGGGTACG GATCAACATC TTTGGGTCGC TGCGAGGTCC CTCGATGGTG ATGCGGTTAA TTCCGCTGCG CATTCTCAGC CTCGATGAGC TGAGCCTACC GCCGGTTTTC CGCGACATCT GCTACTACCC CAAAGGACTG GTACTGGTCA CCGGCCCCAC AGGGTCAGGC AAGTCGACCA CGCTGGCCGC CATGATTGAT TTCATCAATC AGGAAATGGC GAAGAATATC ATCACCATCG AAGACCCGAT TGAATTTGTT CACCAAAGTC AGCGATCGCT CATTAAGCAG CGGGAAGTCG GCGTTCATAC CCGTCAATTT GAAGCAGCAC TACGGGCCTC TTTGCGTGAG GATCCTGACA TTATCTTGGT GGGTGAGCTG CGCGATCGCG AAACGATCAA TACCGCTCTC AAAGCTGCAC AAACCGGCCA CCTCGTGATG GCTACTCTGC ACACTAACAG CGCTGTCAAA ACAATTGAGC GGGTACTCAA TATGTTTGAA CCCGCTGAAC AACCGCCTGT TCGAGTTGCC TTGGCCGAGT CGCTCGTGTC TGTGATTGCG CAAGGTCTCT GCCGCACGAT TCACGGCAAG CGGACTGCCT ATCACGAAAT TTTGATTAAC ACTGACGCGA TCAAGGACTA CATTATTCGC GGCGAACTTG AGGAAGTTGA GCAACTAATT CCTAAATGTA CCTTTGACGG CATGTGCACC AGCAATCAGT CCCTATTCCG TCTCTTTAAC GAAGGCAAAA TTAGTGAGGA GACTGCACTG GCGCAATCTG GCAAGCCCAA TGAAATGTCT CAGATGCTGC GAGGTCGGGT TTAG
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Protein sequence | MTDTSRLPLP PPPPPFGAGG LSAMPVTQVS ASPATPAAVP QRSANQPTLA EIVRQAYEHD YSDVHLGVGE VPRFRDRGEI VQTTYPVTDT ATFNAWLREV LTEAQVREFE QGLDFDGATQ YDFARVRINI FGSLRGPSMV MRLIPLRILS LDELSLPPVF RDICYYPKGL VLVTGPTGSG KSTTLAAMID FINQEMAKNI ITIEDPIEFV HQSQRSLIKQ REVGVHTRQF EAALRASLRE DPDIILVGEL RDRETINTAL KAAQTGHLVM ATLHTNSAVK TIERVLNMFE PAEQPPVRVA LAESLVSVIA QGLCRTIHGK RTAYHEILIN TDAIKDYIIR GELEEVEQLI PKCTFDGMCT SNQSLFRLFN EGKISEETAL AQSGKPNEMS QMLRGRV
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