Gene Synpcc7942_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2348 
SymbolqueA 
ID3774631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2415233 
End bp2416312 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content58% 
IMG OID637800796 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_401365 
Protein GI81301157 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGC CTTCTCCCTC CGATTGGCAT CTAGATGCCT ACGACTACGA GCTACCACCG 
GACCGGATTG CCCAGAGTGC CGTGGAGCCT CGGGACCATG CCCGCCTATT GGTCTTTCCC
GATCGCGAGC AACTATGGCA TCGGCATTTT TACGATCTGC CGCAACTTCT GCGCCCGGGA
GACTTGTTGA TCGTCAATGA CACGCGGGTT ATCCCTGCTC GACTCTACGG CCAAAAAATC
GAGACCGGCG TGCCCGTTGA AGTGCTGCTA GTCGAGGAAC ACGGACCCGG CTATTGGCTC
ACCCTCGTCA AGCCGGGCAA ACGTCTCAAA CCCGGATCAG CGATCGCCTT TGGGCCGAAT
CCTGAGGATC CTCTCCTGGT TGCTGACGTG GAAGCGAGCG ATCCGGCCAC GGGCGGGCGT
TGGTTACGTT TTCGGGGCGA AGCCGAAGCA TTTTGGTCTC AGCTGGCAAC CCTCGGGGAA
ATGCCACTAC CGCCCTATAT CCACACCACC GCCAGCGATC CTGAACGCTA TCAAACGGTC
TACAGTCGCG AACTCGGAGC AGTAGCCGCA CCGACTGCAG GCCTCCACTT TACGCCTGAG
TTGCTGACAA CCTTGGCAGA CATGGGGATC GCCACGGCTC CCGTGACCCT GCACGTCGGT
ATTGGGACCT TTCGCTCAGT CGATGTGGAG GACATTCGTC AGCACGAGAT GCATAGCGAG
CGGATGATGG TTCCAGCCGC TACGGTTGAG AAAATTCAGG CGACCAAAGC GGCCGGTGGC
CGGGTGATCG CAGTTGGTAC CACCAGCGTG CGAGCGATTG AAGGAGCCGC TGCTTCGGGT
GAACTCAAAC CAGGGAGCGA TCGCGTCAAC TTGTTCATTT ATCCGGGCTA TCGCTGGCAG
ATCATCGACG GCTTGATCAC GAACTTCCAC CTGCCACGTT CGAGCCTGAT GATGTTGGTT
AGTGCCTTGA TCGGGCGTGA TCGTCTCTTG TCAGCCTACG CAACGGCGAT CGCTGAACAG
TATCGCTTCT ATTCTTTTGG CGATGCCATG CTGATTCTGC CCGACGCTAA GCTGCCCTGA
 
Protein sequence
MNEPSPSDWH LDAYDYELPP DRIAQSAVEP RDHARLLVFP DREQLWHRHF YDLPQLLRPG 
DLLIVNDTRV IPARLYGQKI ETGVPVEVLL VEEHGPGYWL TLVKPGKRLK PGSAIAFGPN
PEDPLLVADV EASDPATGGR WLRFRGEAEA FWSQLATLGE MPLPPYIHTT ASDPERYQTV
YSRELGAVAA PTAGLHFTPE LLTTLADMGI ATAPVTLHVG IGTFRSVDVE DIRQHEMHSE
RMMVPAATVE KIQATKAAGG RVIAVGTTSV RAIEGAAASG ELKPGSDRVN LFIYPGYRWQ
IIDGLITNFH LPRSSLMMLV SALIGRDRLL SAYATAIAEQ YRFYSFGDAM LILPDAKLP