Gene Synpcc7942_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2342 
Symbol 
ID3774625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2410477 
End bp2410977 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content59% 
IMG OID637800790 
Productphotosystem I reaction center protein subunit XI 
Protein accessionYP_401359 
Protein GI81301151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0220682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.292289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAG ACGTGATTGC AAATGGTGGC ACGCCTGAGA TTGGCAACCT AGCGACGCCG 
ATCAACTCTT CCCCGTTTAC CCGCACCTTT ATCAACGCGC TGCCGATCTA TCGTCGCGGC
CTTAGCTCCA ACCGCCGCGG TCTGGAAATC GGTATGGCTC ATGGCTTCTT GCTCTACGGG
CCGTTCAGCA TTTTGGGCCC TCTGCGCAAT ACCGAAACGG CAGGTTCTGC TGGCCTGTTG
GCAACTGTTG GCTTGGTGGT GATTTTGACG GTGTGCCTGT CGCTCTACGG CAATGCCGGA
TCGGGCCCTT CAGCGGCTGA AAGCACCGTG ACCACTCCGA ATCCGCCCCA AGAACTGTTC
ACCAAAGAGG GCTGGAGCGA GTTCACCAGC GGTTTCATCC TCGGTGGCTT GGGCGGCGCT
TTCTTCGCCT TCTACCTGGC TTCGACCCCC TACGTGCAAC CTCTGGTCAA AATCGCCGCT
GGCGTTTGGT CGGTGCACTA A
 
Protein sequence
MAQDVIANGG TPEIGNLATP INSSPFTRTF INALPIYRRG LSSNRRGLEI GMAHGFLLYG 
PFSILGPLRN TETAGSAGLL ATVGLVVILT VCLSLYGNAG SGPSAAESTV TTPNPPQELF
TKEGWSEFTS GFILGGLGGA FFAFYLASTP YVQPLVKIAA GVWSVH