| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2339 |
|---|
| Symbol | |
|---|
| ID | 3774622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2406813 |
|---|
| End bp | 2407847 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800787 |
|---|
| Product | bifunctional ADP-heptose synthase |
|---|
| Protein accession | YP_401356 |
|---|
| Protein GI | 81301148 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.16445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGG ACCCGACATT TCAGTCTCAG TTAATGCAGG AGCGCGATCG CTTGATTAGC
CTCTTGCACT GCTTCCGCCA AGCCAAAGTG ATGGTGGTCG GCGATCTGAC GCTGGATGAA
TTTCTGACCG GTCGGGTTGA GCGGTTATCG CGCGAAGCAC CCGTCGCGAT TTTGCGGCAT
GAGGAAACGC GGCGCATTCC TGGGGGAGGA GCCAACGCAA TCTATAACTG TGCCAGCCTC
GGCGCTCAAG TACTGGCGGT TGGCCTGGTC GGAGATGATG AGCAGGGTCG TGCCCTGCGA
TCGATTTTTG AGGCCGTCCA GATCAATACC CAAGGCATTC TGGTCGAAGA AGAACGCCCC
ACGGTCACGA AGACGCGGAT TTCAGGCCAT GCTCGTCAAT CCGTGACGCA GCAGATTGTG
CGGCTCGATC GCAAGTCGGA TGAGCCACCA TCGCAACACC ACCAACAAGC TCTGGCCCAC
TACATTGCTG AGCAAATTGA TCGCGTCGAT GCAGTCGTTG GCTCTGACTA TGGCGATGGC
GTTCTCTCGG ATCCTGTGAT TCATGCGATC GCAGCAGCTC CACGTCTGGT CATTGATGCG
CAAGTGGATC TCGATCGCTT TCGGGGGGCA ACCCTATTTA CGCCCAACCT GCCGGAAGCA
GAGTTAGCAG TCGGTTATGC GATCGCGAAT GCGGCGGATC TCCAACGGGC TGGGCAAGAT
CTACTCCAGA AAACCGGCGC AAAAGCCGTC TTGATCACCC GCGGCGAAGA GGGCATGAGC
TTGTTTGAAG CGGACGGCGA ACAGCACCAC ATTCCAGCTT TTAACCGCAC CGACGTGTTT
GATGTGACTG GCGCGGGCGA TACAGTCGTT GCTGCCCTAA CGCTGGCTTT GGTATCCGGT
GCGAATTTCT GGGAGGCAGC AGTGCTTGGC AATTTGGCCG CCAGCCTTGT GGTGCGGGTG
TTTGGCACTG CAACGACCAC TGTGGAAGCA ATGGAGGCCG CTCTCTTGCA ACTTACCGAG
CCCGGAGTGG GATGA
|
|---|
| Protein sequence | MRLDPTFQSQ LMQERDRLIS LLHCFRQAKV MVVGDLTLDE FLTGRVERLS REAPVAILRH
EETRRIPGGG ANAIYNCASL GAQVLAVGLV GDDEQGRALR SIFEAVQINT QGILVEEERP
TVTKTRISGH ARQSVTQQIV RLDRKSDEPP SQHHQQALAH YIAEQIDRVD AVVGSDYGDG
VLSDPVIHAI AAAPRLVIDA QVDLDRFRGA TLFTPNLPEA ELAVGYAIAN AADLQRAGQD
LLQKTGAKAV LITRGEEGMS LFEADGEQHH IPAFNRTDVF DVTGAGDTVV AALTLALVSG
ANFWEAAVLG NLAASLVVRV FGTATTTVEA MEAALLQLTE PGVG
|
|---|
| |