Gene Synpcc7942_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2331 
Symbol 
ID3774614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2398625 
End bp2399272 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content53% 
IMG OID637800779 
Productcytochrome b6 
Protein accessionYP_401348 
Protein GI81301140 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.520251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGG TCTACGACTG GTTCGAGGAG CGTCTAGAGA TCCAAGCGAT CGCTGAAGAC 
GTTTCCAGCA AGTACGTTCC TCCCCACGTC AACATCTTCT ATTGTCTGGG CGGGATTACG
TTAACTTGTT TTCTCATTCA GTTTGCCACC GGCTTTGCAA TGACGTTTTA TTACAAGCCG
ACGGTTGCTG AAGCATATAG CTCCGTGCAA TTCATCATGA ACCAAGTCAA CTTCGGTTGG
CTGATCCGCT CCATCCACCG CTGGTCTGCC AGCATGATGG TGCTGATGAT GATTCTGCAC
GTTTTCCGTG TTTATCTGAC TGGTGGTTTC AAACGCCCTC GCGAATTGAC CTGGGTCACT
GGCGTCGTCA TGGCAGTGAT CACCGTGACC TTCGGGGTGA CCGGCTACTC GCTGCCTTGG
GACCAAGTCG GCTACTGGGC CGTCAAAATT GTCTCGGGTG TTCCCGAAGC GATTCCGGTG
GTTGGGTCTG CCATGGTTGA ACTACTGCGG GGCGGCCAAA GCGTCGGTCA GGCAACTCTG
ACCCGCTTCT ACAGCCTCCA CACCTTTGTC TTGCCTTGGC TGATTGCAGT GTTTATGCTG
CTTCACTTCC TGATGATCCG GAAGCAAGGC ATCTCTGGTC CCCTCTAA
 
Protein sequence
MSKVYDWFEE RLEIQAIAED VSSKYVPPHV NIFYCLGGIT LTCFLIQFAT GFAMTFYYKP 
TVAEAYSSVQ FIMNQVNFGW LIRSIHRWSA SMMVLMMILH VFRVYLTGGF KRPRELTWVT
GVVMAVITVT FGVTGYSLPW DQVGYWAVKI VSGVPEAIPV VGSAMVELLR GGQSVGQATL
TRFYSLHTFV LPWLIAVFML LHFLMIRKQG ISGPL