| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2328 |
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| Symbol | |
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| ID | 3774611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2394836 |
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| End bp | 2395927 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800776 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_401345 |
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| Protein GI | 81301137 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.759887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAC CGAACGGTGG CTCCCATCAA TCACTAGAGG CTTTACTCGC GGCCTACGAT
TTCCGTCTGC GTCATGAACC GCGCAATTGC ACTCTCTGGA ATAATCGCGG CATTCTCTTG
GAGCGCCTCA ACCGCTGGAC AGAAGCACTG GCTAGCTACA ACTGTGCGTT AGAAATTACA
CCTCAGCGTC AGGAAGCCCT CAATAATCGG GCGATCGTCC TAGAGCATTT GGGGCGGCTA
CCGGAAGCAG TCGAGTCCTA CGAACAAGCC CTCGCCATCG ATCGCCAGCA ACCCGAAGTC
TGGAACAACC GTGGCATTGT CCTGCGTAAG CTGGGCCGAC TAGAGGATGC GATCGCCAGT
TATCAGCAAG CGATCGCCCT TGCCGCCCAC TATGCCCAAG CGTGGGCCAA CTGTGGCTTT
GCTCTGTGGC AACAGGGGCG CTACCGGGAG GCAGTACGTC ACTACGAACA GTCTGTGGCG
ATCGACCCTG ATCAGAGCAG TGCTTGGCGG CAGCTAGGGC AGATTTACCT GAGTGTCGAT
CAACCCGATC AGGCCTTGCG CTGTTTGGAT CAAGCGATCG CCCTCCAACC GCAGCAGGCG
ACGGCTTGGA CTTGGCGCGG TCATGCCCTC TACAACCTCG GGCAGTATGC AGCTGCACTG
ACCTCCTACG AAAACGCAGA ACTTCTGGGC GATCGCCCCC TCCTGCTGTC AATCCAACGG
GGTCATACGC TGGCGCAGCT CGAACGCTAC GAAGAGGCGC TGGCCAGCTA CGCCGCAATT
CTGCCGCAAT TAACAGGCGA AGCTGCCGCA GAGGTGGCCT ACTACCAAGG ACTCGTTTGG
GCTTACCTCC AGGACTGGAC CGCAGCATTG GCTGCTTTTG ATCAGGCGAT CGCAGGCAAT
CCAGACTTGG CCGAGGCTTG GTACAATCGC GCCGCCCTCC ACGCCCGACT CGATCAACCG
GTCGCAGCGA TCGCGGATCT CCAACAGGCG ATCGCGCTAG ATCCAGACAC CTATCGTTCT
CTAGCTGCTG AGGATCCGGA TTATCAAACG CTTCACGCAC ATCCTGACTG GATCCAACTC
CAAAGGGCTT AG
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| Protein sequence | MSIPNGGSHQ SLEALLAAYD FRLRHEPRNC TLWNNRGILL ERLNRWTEAL ASYNCALEIT
PQRQEALNNR AIVLEHLGRL PEAVESYEQA LAIDRQQPEV WNNRGIVLRK LGRLEDAIAS
YQQAIALAAH YAQAWANCGF ALWQQGRYRE AVRHYEQSVA IDPDQSSAWR QLGQIYLSVD
QPDQALRCLD QAIALQPQQA TAWTWRGHAL YNLGQYAAAL TSYENAELLG DRPLLLSIQR
GHTLAQLERY EEALASYAAI LPQLTGEAAA EVAYYQGLVW AYLQDWTAAL AAFDQAIAGN
PDLAEAWYNR AALHARLDQP VAAIADLQQA IALDPDTYRS LAAEDPDYQT LHAHPDWIQL
QRA
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