| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2316 |
|---|
| Symbol | atpC |
|---|
| ID | 3774599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2385395 |
|---|
| End bp | 2385808 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800764 |
|---|
| Product | F0F1 ATP synthase subunit epsilon |
|---|
| Protein accession | YP_401333 |
|---|
| Protein GI | 81301125 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
|---|
| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.711596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA CTGTCCGCGT CATTGCTCCC GACCGAACGG TTTGGGACGC GCCTGCCCAA
GAAGTCATTC TGCCTAGCAC CACCGGTCAA CTCGGTATCT TGCCGGGTCA CGCCCCTTTG
CTCTCTGCCT TGGACACCGG TGTGTTGCGG GTGCGAGCTG ACAAAGAGTG GCTGGCGATC
GCTGTTTTAG GCGGCTTCGC TGAAGTTGAA AACAACGAAG TTACGGTGTT GGTCAACGCT
GCTGAACGGG GCGACAAGAT CGACCTCGAA GAAGCCCGTG CCGCCTTTAG TCAGGCTGAT
GAACGCTTGA AAGGCGTCAA AGAAGACGAT CGCCAAGGCA AGTTCCAAGC AACGCAAGCC
TACCGTCGGG CACGGGCACG CTTGCAGGCT GCGGGTGGTC TAGTCAGCGT TTGA
|
|---|
| Protein sequence | MSLTVRVIAP DRTVWDAPAQ EVILPSTTGQ LGILPGHAPL LSALDTGVLR VRADKEWLAI
AVLGGFAEVE NNEVTVLVNA AERGDKIDLE EARAAFSQAD ERLKGVKEDD RQGKFQATQA
YRRARARLQA AGGLVSV
|
|---|
| |