Gene Synpcc7942_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2312 
Symbol 
ID3774595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2380457 
End bp2381530 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content59% 
IMG OID637800760 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 
Protein accessionYP_401329 
Protein GI81301121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.506924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.77873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGTTG CTCAACCGCG CCTCCTCTTT GCTGCTAGCG GCACCGGTGG CCATGTCTTT 
CCGGCTCTAG CGGTTGCTGA AGCACTGCCT GAAGCGAAGA TCGATTGGCT GGGCGTGCCC
GATCGCCTCG AGACGCAATT GGTGGGCGAT CGCTATCCAC TCCATACAAT CCGCGTCGGC
GGCTTTCAGG GATCTTGGCT TCTGCGACCG TTGACAGCGC TGCGCTTGAT TGGCGCAATT
TTTAAGGTGC GACGCCTGTT GAAGCGACAG CAAATCGAAG CAGTCTTCAC GACGGGCGGC
TATATTGCGG GTCCTGCGAT CGCGGCCGCT TGGAGTCTGG GAATTCCCGT CGTTCTGCAT
GAATCAAACG CACTGCCGGG CAAAACAACA CGCTTACTTA GCCGGTTTTG TCGACGTGTT
GCCCTTGGCT TTGCCGAGGC TGGCGAGTAT CTACCGGGTC GGCCGCTGCA AGTAGTCGGC
ACCCCGTTGC GATCGCAGTT TTATCAGCCC AGCCAGCATG GTCTGCCAAT TCCTGAGAAT
GTGCCAGTCT TGCTAGTGAT GGGTGGCAGC CAAGGCGCAG TCGCCATCAA TCGGTTAGTG
CGAGCTGCTG CTCCTGCTTG GTTGGCAGCA GGCCTGTGGA TCGTGCATCT GACCGGCCAG
CAAGATCCCG ATCGCGGCCA GCTCCAACAT CCGCAGTACA TCGAGCTGTC GTTTGTCGAC
AACGTTGCGC CGCTTTTGAA TCGAGCCGAC TTTTCGATCA GTCGCGCCGG TGCTGGCAGT
TTGGCGGAAT TGGCAGCGGC CGGATTGCCT AGCTTGCTGA TTCCCTATCC CTTTGCCGCA
GAAGATCACC AGACCTTTAA CGCCCGCATT TTTGCCAAGG CTGGGGCCGC GATCCTAGCC
CCGCAATCAG AACTGACGGT AGAGCAGCTT CAGCAGCAGA TCTTGGATTT GTTACGGGCG
CGACTGGGCG CTGCGATCGC CAATCCCTTG CCGAAGATGG CGGCTGCCGC AGGCAAACTC
CACGTCGCTG ACAGCGCTGA ACAGGTTGCC AATCTGCTGC GATCGCTTCT GTAA
 
Protein sequence
MSVAQPRLLF AASGTGGHVF PALAVAEALP EAKIDWLGVP DRLETQLVGD RYPLHTIRVG 
GFQGSWLLRP LTALRLIGAI FKVRRLLKRQ QIEAVFTTGG YIAGPAIAAA WSLGIPVVLH
ESNALPGKTT RLLSRFCRRV ALGFAEAGEY LPGRPLQVVG TPLRSQFYQP SQHGLPIPEN
VPVLLVMGGS QGAVAINRLV RAAAPAWLAA GLWIVHLTGQ QDPDRGQLQH PQYIELSFVD
NVAPLLNRAD FSISRAGAGS LAELAAAGLP SLLIPYPFAA EDHQTFNARI FAKAGAAILA
PQSELTVEQL QQQILDLLRA RLGAAIANPL PKMAAAAGKL HVADSAEQVA NLLRSLL