Gene Synpcc7942_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2310 
Symbol 
ID3774593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2377778 
End bp2379247 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content58% 
IMG OID637800758 
ProductL-2,4-diaminobutyrate decarboxylase 
Protein accessionYP_401327 
Protein GI81301119 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.506086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.726788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTCTT CTGCGCCTTT GCCGGAAACG GCTTTTTTGC GCCCGGATGG GAGTAACCGC 
GAGGCGATCG CGGCTGTAGC TCAGTTGGCG CTTGAGCAGT TACTCAATCT CGGTAGCCAG
GCGGATCAGC GATCGCCCGT CCCCACTTGG CAAGGAAGCG AGCGACACGT CGGAATTCCG
GCGCAGTCTG TGCCCTTGCC GGACCTACTG CAGCAACTGG AGCCGCTGCT GGCGCAAGCG
ATGAATCCAG CCAATCCGGG CTATCTCGGC CACATGGATC CGGTGGCGAG CACTGCGTCA
GTCATTGGTG ATGCGATCGC AGCACTTCTC AACAACAATT TGCTCAGCGT CGAGATGTCG
CCCAGCTTCT CGCGCTTGGA AACGGCTGTC CTGCGAGAGT TAGCGCAACG GTTTGGGCTG
GGGGACGAGG CTGGAGGATT GCTGCTGAGC GGCGGCAGTC TCGCCAATCT TCAAGCGATC
GCCCTGGCAC GCAATTGGGC CTTGCAGGTA CAGGAAACTG GCCTGGCCGG ACTAACTCAG
AGACCAATTC TGTTTGCCTC TGAAGCTGCC CATACTTCGA TTCAGAAAGC GGCGATGCTG
CTGGGGCTAG GGAGCCAAGC CGTGATTCCA ATCGCAACCG ATCGCCGAGG TCGGATGCAA
GTTGCCGCCC TCACAGAAGC GATCGCCTCG GCCCGCCGCC AAGGTCAGCG TCCATTTTGT
TTGGTCGCAA CTGCAGGCAC CACCGTCACT GGCAGCATTG ATCCACTCCC AGAACTGAGC
GCGATCGCCC GTACTGAAGG GCTGTGGTTC CACGTTGATG CCTCCTATGG CGGAGCTGTG
ATCTTTTCGC CGCGCTATGC CCATAAGCTC CAGGGCATTG AGCAGGCTAA TTCCGTTACC
TTCAATCCGC AGAAGTGGCT CTGTGTTGCT AAAACGAGCG CTTCGTTACT GCTGCGCGAC
TGGTCGTTAC TGACCGAGCA CTTCCGCATT GCTGCGCCCT ATATGGGTGA AGCTGACGAC
CTGATCAACC TTGGTGAAGT CTCTGTCCAA GGCACTCGAC CGGCAGACAT TCTCAAGCTC
TGGTTGACGC TCCAACACTT CGGCGATCGC GGTTGTGCTG CGCTGGTGGA ACATGGCCTA
CGACTGTGCC GCTGCTTTGT TGCAGAATTG CGCCAACGCC CCCAGATTCA AGTGGCGACC
CCGCCCGATT TGAATATCCT CTGTTTCCGT TTGGCGAGCG ATCGCCTGAC TGCGGAGCTG
CAGCAATTTC TCCTCGATCG GTACTTCTTC TTGTCACTGC CAAGATTCCG CGATCGCCTC
TGGCTGAAGG CGGTGCTGGT CAACCCGTTT ACGACGCCCG AACACATCCG CCAACTCTTT
GGAGCGATCG ATGCTTTTTG TCGCGATCGC CAGATCCAGC CGGATCCCCA AAGTCAAGAC
AACGAGATCA CTTACTCACA GTCGTTATGA
 
Protein sequence
MNSSAPLPET AFLRPDGSNR EAIAAVAQLA LEQLLNLGSQ ADQRSPVPTW QGSERHVGIP 
AQSVPLPDLL QQLEPLLAQA MNPANPGYLG HMDPVASTAS VIGDAIAALL NNNLLSVEMS
PSFSRLETAV LRELAQRFGL GDEAGGLLLS GGSLANLQAI ALARNWALQV QETGLAGLTQ
RPILFASEAA HTSIQKAAML LGLGSQAVIP IATDRRGRMQ VAALTEAIAS ARRQGQRPFC
LVATAGTTVT GSIDPLPELS AIARTEGLWF HVDASYGGAV IFSPRYAHKL QGIEQANSVT
FNPQKWLCVA KTSASLLLRD WSLLTEHFRI AAPYMGEADD LINLGEVSVQ GTRPADILKL
WLTLQHFGDR GCAALVEHGL RLCRCFVAEL RQRPQIQVAT PPDLNILCFR LASDRLTAEL
QQFLLDRYFF LSLPRFRDRL WLKAVLVNPF TTPEHIRQLF GAIDAFCRDR QIQPDPQSQD
NEITYSQSL