Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2310 |
Symbol | |
ID | 3774593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2377778 |
End bp | 2379247 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637800758 |
Product | L-2,4-diaminobutyrate decarboxylase |
Protein accession | YP_401327 |
Protein GI | 81301119 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.506086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.726788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATTCTT CTGCGCCTTT GCCGGAAACG GCTTTTTTGC GCCCGGATGG GAGTAACCGC GAGGCGATCG CGGCTGTAGC TCAGTTGGCG CTTGAGCAGT TACTCAATCT CGGTAGCCAG GCGGATCAGC GATCGCCCGT CCCCACTTGG CAAGGAAGCG AGCGACACGT CGGAATTCCG GCGCAGTCTG TGCCCTTGCC GGACCTACTG CAGCAACTGG AGCCGCTGCT GGCGCAAGCG ATGAATCCAG CCAATCCGGG CTATCTCGGC CACATGGATC CGGTGGCGAG CACTGCGTCA GTCATTGGTG ATGCGATCGC AGCACTTCTC AACAACAATT TGCTCAGCGT CGAGATGTCG CCCAGCTTCT CGCGCTTGGA AACGGCTGTC CTGCGAGAGT TAGCGCAACG GTTTGGGCTG GGGGACGAGG CTGGAGGATT GCTGCTGAGC GGCGGCAGTC TCGCCAATCT TCAAGCGATC GCCCTGGCAC GCAATTGGGC CTTGCAGGTA CAGGAAACTG GCCTGGCCGG ACTAACTCAG AGACCAATTC TGTTTGCCTC TGAAGCTGCC CATACTTCGA TTCAGAAAGC GGCGATGCTG CTGGGGCTAG GGAGCCAAGC CGTGATTCCA ATCGCAACCG ATCGCCGAGG TCGGATGCAA GTTGCCGCCC TCACAGAAGC GATCGCCTCG GCCCGCCGCC AAGGTCAGCG TCCATTTTGT TTGGTCGCAA CTGCAGGCAC CACCGTCACT GGCAGCATTG ATCCACTCCC AGAACTGAGC GCGATCGCCC GTACTGAAGG GCTGTGGTTC CACGTTGATG CCTCCTATGG CGGAGCTGTG ATCTTTTCGC CGCGCTATGC CCATAAGCTC CAGGGCATTG AGCAGGCTAA TTCCGTTACC TTCAATCCGC AGAAGTGGCT CTGTGTTGCT AAAACGAGCG CTTCGTTACT GCTGCGCGAC TGGTCGTTAC TGACCGAGCA CTTCCGCATT GCTGCGCCCT ATATGGGTGA AGCTGACGAC CTGATCAACC TTGGTGAAGT CTCTGTCCAA GGCACTCGAC CGGCAGACAT TCTCAAGCTC TGGTTGACGC TCCAACACTT CGGCGATCGC GGTTGTGCTG CGCTGGTGGA ACATGGCCTA CGACTGTGCC GCTGCTTTGT TGCAGAATTG CGCCAACGCC CCCAGATTCA AGTGGCGACC CCGCCCGATT TGAATATCCT CTGTTTCCGT TTGGCGAGCG ATCGCCTGAC TGCGGAGCTG CAGCAATTTC TCCTCGATCG GTACTTCTTC TTGTCACTGC CAAGATTCCG CGATCGCCTC TGGCTGAAGG CGGTGCTGGT CAACCCGTTT ACGACGCCCG AACACATCCG CCAACTCTTT GGAGCGATCG ATGCTTTTTG TCGCGATCGC CAGATCCAGC CGGATCCCCA AAGTCAAGAC AACGAGATCA CTTACTCACA GTCGTTATGA
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Protein sequence | MNSSAPLPET AFLRPDGSNR EAIAAVAQLA LEQLLNLGSQ ADQRSPVPTW QGSERHVGIP AQSVPLPDLL QQLEPLLAQA MNPANPGYLG HMDPVASTAS VIGDAIAALL NNNLLSVEMS PSFSRLETAV LRELAQRFGL GDEAGGLLLS GGSLANLQAI ALARNWALQV QETGLAGLTQ RPILFASEAA HTSIQKAAML LGLGSQAVIP IATDRRGRMQ VAALTEAIAS ARRQGQRPFC LVATAGTTVT GSIDPLPELS AIARTEGLWF HVDASYGGAV IFSPRYAHKL QGIEQANSVT FNPQKWLCVA KTSASLLLRD WSLLTEHFRI AAPYMGEADD LINLGEVSVQ GTRPADILKL WLTLQHFGDR GCAALVEHGL RLCRCFVAEL RQRPQIQVAT PPDLNILCFR LASDRLTAEL QQFLLDRYFF LSLPRFRDRL WLKAVLVNPF TTPEHIRQLF GAIDAFCRDR QIQPDPQSQD NEITYSQSL
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