Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2308 |
Symbol | gcvT |
ID | 3774591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2375865 |
End bp | 2376983 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800756 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_401325 |
Protein GI | 81301117 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.512156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCTGA CTGTGACCGT TTCTCTCTTG TCTTCCCCTC TGCATTCAGT GTGCACTTCA GCGGGAGCTC GGTTCACGGG GTTTGCAGGC TGGGAGTTAC CCCTGCAGTT TCAAGGGCTC ATGCAAGAGC ATCTCGCTGT TCGTGAGCGA GCAGGGCTAT TTGATATTTC CCACATGGGC AAGTTTCAGT TGCGCGGCTC CGGCCTTCGG GCGGCTTTGC AACGTCTGCT GCCCAGTGAT TTGACGACTC TGTTGCCGGG GCAGGCTCAA TACTCAGTGC TTTTGAATGA AGCAGGAGGC TGCCTTGATG ACCTGATTGT CTACTGGCAG GGAATTGTCG ATGGTGTCGA ACAGGCGTTT TTGATTGTCA ACGCTGCGAC GACTGACAGC GATCGCCTCT GGCTGACAGA GCATTTACCG CCCGCAATCG CCCTCCTAGA TCTCAGTCAA GACTTGGCGT TAGTTGCGAT TCAAGGTCCC CAAGCGATCG CTTTCCTTCA GCCTCTTGTC AGTTGCGATC TGGCAGAACT GCCGCGCTTT AGCCACACGG TGACTTCGAT CGCTGGTCAA CCGGCCTTTG TTGCCCGCAC CGGCTACACG GGCGAAGATG GCTGCGAGGT GATGCTGCCG CCCGCAGCCG CGATCACTCT CTGGCAACAG CTGACCGCCG CTGGGGTTGT GCCCTGTGGA CTGGGGGCTC GCGATACGCT GCGGCTGGAA GCCGCTATGC CGCTCTACGG TCATGAGCTG GACACTGACA CCAATCCTCT CGAAGCTGGA TTGGGCTGGG TAGTTCATCT CGACCGGAAT CCTGACTTCC TCGGGCGCGA TCGCCTTGTG CAAGCGAAAA CCAACGGTCT CGAACGTCGC TTGGTCGGCC TCGAGCTGCC TGGCCGGAAT ATTGCCCGAC ATGGCTATCC TGTTGCGATC GCTGATACCA CGGTCGGAAT TGTTACCAGT GGCAGTTGGT CGCCCACCCT CAGCAAAGCG ATCGCCCTTG CCTACGTCCC TCCCGCCTTG GCCAATCTTG GGCAGGAACT CTGGGTCGAA ATTCGGGGCA AACAGGTGCC CGCCACAGTC GTCAAGCGCC CCTTCTACCG TGGCAGCCAG TTCCGTTAA
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Protein sequence | MTLTVTVSLL SSPLHSVCTS AGARFTGFAG WELPLQFQGL MQEHLAVRER AGLFDISHMG KFQLRGSGLR AALQRLLPSD LTTLLPGQAQ YSVLLNEAGG CLDDLIVYWQ GIVDGVEQAF LIVNAATTDS DRLWLTEHLP PAIALLDLSQ DLALVAIQGP QAIAFLQPLV SCDLAELPRF SHTVTSIAGQ PAFVARTGYT GEDGCEVMLP PAAAITLWQQ LTAAGVVPCG LGARDTLRLE AAMPLYGHEL DTDTNPLEAG LGWVVHLDRN PDFLGRDRLV QAKTNGLERR LVGLELPGRN IARHGYPVAI ADTTVGIVTS GSWSPTLSKA IALAYVPPAL ANLGQELWVE IRGKQVPATV VKRPFYRGSQ FR
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